RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 ONECUT1Q9UBC0 465 aa11.93□□□□□ -0.5
MSRB3-209ENST00000540804 KAAG1Q9UBP8 84 aa11.93□□□□□ -0.5
MSRB3-209ENST00000540804 LRP12Q9Y561 859 aa11.93□□□□□ -0.5
MSRB3-209ENST00000540804 AQP12BA6NM10 295 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 AKR7A2O43488 359 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 E2F6O75461 281 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 SLC2A5P22732 501 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 KRTAP10-3P60369 221 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 RPS7P62081 194 aaKnown RBP11.92□□□□□ -0.5
MSRB3-209ENST00000540804 CBX1P83916 185 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 KLRD1Q13241 179 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 APOFQ13790 326 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 PDCD1Q15116 288 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 STUMQ69YW2 141 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 BCDIN3DQ7Z5W3 292 aaKnown RBP11.92□□□□□ -0.5
MSRB3-209ENST00000540804 SPATA24Q86W54 205 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 AQP12AQ8IXF9 295 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 PNKDQ8N490 385 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 GALNT4Q8N4A0 578 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 LY6G5BQ8NDX9 201 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 OR5P3Q8WZ94 311 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 RNF170Q96K19 258 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 PKP2Q99959 881 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 MICU1Q9BPX6 476 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 C1orf21Q9H246 121 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 SP140LQ9H930 580 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 NOX4Q9NPH5 578 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 SIRT7Q9NRC8 400 aa11.92□□□□□ -0.5
MSRB3-209ENST00000540804 CCDC182A6NF36 153 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 POM121CA8CG34 1229 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 M0R129 80 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 FKBP6O75344 327 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 RHBDL1O75783 438 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 APOC1P02654 83 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 MUC1P15941 1255 aaPredicted RBP11.91□□□□□ -0.5
MSRB3-209ENST00000540804 ALOX5APP20292 161 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 CFL1P23528 166 aaKnown RBP11.91□□□□□ -0.5
MSRB3-209ENST00000540804 RAG2P55895 527 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 BPIFB3P59826 476 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 DGUOKQ16854 277 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 CDONQ4KMG0 1287 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 Q8N7P7 452 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 SCCPDHQ8NBX0 429 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 CSNK2A3Q8NEV1 391 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 H1FXQ92522 213 aaKnown RBP11.91□□□□□ -0.5
MSRB3-209ENST00000540804 GAFA1Q96PS6 74 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 RTL8AQ9BWD3 113 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 ELL3Q9HB65 397 aaPredicted RBP11.91□□□□□ -0.5
MSRB3-209ENST00000540804 HAO2Q9NYQ3 351 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 TVP23BQ9NYZ1 205 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 KIF17Q9P2E2 1029 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 ZNF391Q9UJN7 358 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 COPS3Q9UNS2 423 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 PKD1L1Q8TDX9 2849 aa11.91□□□□□ -0.5
MSRB3-209ENST00000540804 ANXA2P2A6NMY6 339 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 MAGEB4O15481 346 aaPredicted RBP11.9□□□□□ -0.5
MSRB3-209ENST00000540804 PRODHO43272 600 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 NDUFB3O43676 98 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 TIPRLO75663 272 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 ECDO95905 644 aaPredicted RBP11.9□□□□□ -0.5
MSRB3-209ENST00000540804 CST4P01036 141 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 KNG1P01042 644 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 HMGN1P05114 100 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 CRYBA1P05813 215 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 TGM4P49221 684 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 GPM6AP51674 278 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 PSMA6P60900 246 aaKnown RBP11.9□□□□□ -0.5
MSRB3-209ENST00000540804 IL5RAQ01344 420 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 GK3PQ14409 553 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 CEP78Q5JTW2 689 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 TREML4Q6UXN2 200 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 RHOUQ7L0Q8 258 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 SLC36A1Q7Z2H8 476 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 KRT77Q7Z794 578 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 ZNF454Q8N9F8 522 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 WFDC12Q8WWY7 111 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 SLC7A6OSQ96CW6 309 aaPredicted RBP11.9□□□□□ -0.5
MSRB3-209ENST00000540804 FAM71F1Q96KD3 344 aaPredicted RBP11.9□□□□□ -0.5
MSRB3-209ENST00000540804 RAB3IPQ96QF0 476 aaPredicted RBP11.9□□□□□ -0.5
MSRB3-209ENST00000540804 DCTN5Q9BTE1 182 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 RGCCQ9H4X1 137 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 ZNF556Q9HAH1 456 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 SLC25A19Q9HC21 320 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 FAM206AQ9NX38 181 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 LAMP5Q9UJQ1 280 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 MPC1Q9Y5U8 109 aa11.9□□□□□ -0.5
MSRB3-209ENST00000540804 RNASEK-C17orf49H0YIS7 233 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 GYG2O15488 501 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 GPR137BO60478 399 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 DCTDP32321 178 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 IER3P46695 156 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 DAPP51397 102 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 MFGE8Q08431 387 aaPredicted RBP11.89□□□□□ -0.51
MSRB3-209ENST00000540804 FLOT2Q14254 428 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 SNAPC1Q16533 368 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 ZNF788Q6ZQV5 615 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 TRPM8Q7Z2W7 1104 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 ZDHHC23Q8IYP9 409 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 SSMEM1Q8WWF3 244 aa11.89□□□□□ -0.51
MSRB3-209ENST00000540804 TEAD3Q99594 435 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms