RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PAX2Q02962 417 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 ROM1Q03395 351 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 BNIP1Q12981 228 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 TMED1Q13445 227 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 LCE2DQ5TA82 110 aaPredicted RBP8.65□□□□□ -1.02
CDCA3-208ENST00000540683 NXNL2Q5VZ03 156 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 FAHD1Q6P587 224 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 SHISA2Q6UWI4 295 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 PRSS45Q7RTY3 260 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 KIR3DL3Q8N743 410 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 DTX3Q8N9I9 347 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 OR5A2Q8NGI9 324 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 TBC1D15Q8TC07 691 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 ZNRF4Q8WWF5 429 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 LRTOMTQ8WZ04 291 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 BRD7Q9NPI1 651 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 RASL12Q9NYN1 266 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 ZNF69Q9UC07 566 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 ENPP5Q9UJA9 477 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 POLDIP2Q9Y2S7 368 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 LRP12Q9Y561 859 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 AP4S1Q9Y587 144 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 POMT1Q9Y6A1 747 aa8.65□□□□□ -1.02
CDCA3-208ENST00000540683 hCG_1809904A0A1W2PP81 198 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 A0A1W2PPE2 198 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 A0A1W2PR64 198 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 A0A1W2PRV1 198 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 DNAJC9-AS1A6NH13 148 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 SRRM5B3KS81 715 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF670-ZNF695F2Z2N8 137 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 SELENOFO60613 162 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 RGS9O75916 674 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-208ENST00000540683 SLC2A5P22732 501 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 EEF1B2P24534 225 aaKnown RBP8.64□□□□□ -1.03
CDCA3-208ENST00000540683 ATP6V1E1P36543 226 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 FGF12P61328 243 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 SRSF2Q01130 221 aaKnown RBP8.64□□□□□ -1.03
CDCA3-208ENST00000540683 EGR3Q06889 387 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 PTGES3Q15185 160 aaKnown RBP8.64□□□□□ -1.03
CDCA3-208ENST00000540683 ATP6AP1Q15904 470 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 CEACAM21Q3KPI0 293 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 CDONQ4KMG0 1287 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 FAM76BQ5HYJ3 339 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 ATPAF1Q5TC12 328 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-208ENST00000540683 NCR3LG1Q68D85 454 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 SFRP4Q6FHJ7 346 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-208ENST00000540683 LYPD4Q6UWN0 246 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 WDR82Q6UXN9 313 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF841Q6ZN19 808 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 MEPCEQ7L2J0 689 aaKnown RBP8.64□□□□□ -1.03
CDCA3-208ENST00000540683 KRT74Q7RTS7 529 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF573Q86YE8 665 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 GCSAMQ8N6F7 178 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 ZDHHC22Q8N966 263 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 SCCPDHQ8NBX0 429 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 SSMEM1Q8WWF3 244 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 C22orf15Q8WYQ4 148 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 OR5P3Q8WZ94 311 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 ST8SIA4Q92187 359 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 PIGCQ92535 297 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 DACT3Q96B18 629 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-208ENST00000540683 SLC7A6OSQ96CW6 309 aaPredicted RBP8.64□□□□□ -1.03
CDCA3-208ENST00000540683 ITPKCQ96DU7 683 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 MRPL48Q96GC5 212 aaKnown RBP8.64□□□□□ -1.03
CDCA3-208ENST00000540683 RNF170Q96K19 258 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 WDFY2Q96P53 400 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 PKP2Q99959 881 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 DPAGT1Q9H3H5 408 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 CNTD2Q9H8S5 307 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 HAO2Q9NYQ3 351 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 WARS2Q9UGM6 360 aaKnown RBP8.64□□□□□ -1.03
CDCA3-208ENST00000540683 IKZF2Q9UKS7 526 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 FAM96BQ9Y3D0 163 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 RHBDD3Q9Y3P4 386 aa8.64□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF850A8MQ14 1090 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 DVL1O14640 695 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 GYPAP02724 150 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 PRKACGP22612 351 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 CDC42P60953 191 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 PRDX4Q13162 271 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 SMIM21Q3B7S5 101 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 AWAT1Q58HT5 328 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 KLF17Q5JT82 389 aaPredicted RBP8.63□□□□□ -1.03
CDCA3-208ENST00000540683 FAM201AQ5SY85 155 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 ZNF684Q5T5D7 378 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 BCL2L15Q5TBC7 163 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 C16orf87Q6PH81 154 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 METAP1DQ6UB28 335 aaPredicted RBP8.63□□□□□ -1.03
CDCA3-208ENST00000540683 C1orf122Q6ZSJ8 110 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 BTN2A1Q7KYR7 527 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 TMEM179BQ7Z7N9 219 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 FAM90A1Q86YD7 464 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 OR8B12Q8NGG6 310 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 OR4F5Q8NH21 305 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 TMEM163Q8TC26 289 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 UTP4Q969X6 686 aaKnown RBP8.63□□□□□ -1.03
CDCA3-208ENST00000540683 TMIGD2Q96BF3 282 aa8.63□□□□□ -1.03
CDCA3-208ENST00000540683 DUS3LQ96G46 650 aaKnown RBP8.63□□□□□ -1.03
CDCA3-208ENST00000540683 CENPNQ96H22 339 aaPredicted RBP8.63□□□□□ -1.03
CDCA3-208ENST00000540683 OR8B4Q96RC9 309 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms