RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 FOXG1P55316 489 aaPredicted RBP14.88□□□□□ -0.03
LTBR-207ENST00000539925 RPS27AP62979 156 aaKnown RBP14.88□□□□□ -0.03
LTBR-207ENST00000539925 MEF2DQ14814 521 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 PPA1Q15181 289 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 CARTPTQ16568 116 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 CDNFQ49AH0 187 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 INO80CQ6PI98 192 aaPredicted RBP14.88□□□□□ -0.03
LTBR-207ENST00000539925 ZNF584Q8IVC4 421 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 FAM89BQ8N5H3 189 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 RBMXL3Q8N7X1 1067 aaKnown RBP14.88□□□□□ -0.03
LTBR-207ENST00000539925 MED30Q96HR3 178 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 SPACA5Q96QH8 159 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 TM2D1Q9BX74 207 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 METTL9Q9H1A3 318 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 OBP2BQ9NPH6 170 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 MCUBQ9NWR8 336 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 ING3Q9NXR8 418 aa14.88□□□□□ -0.03
LTBR-207ENST00000539925 A0A0B4J293 547 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 MBD3L4A6NDZ8 208 aaPredicted RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 MBD3L3A6NE82 208 aaPredicted RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 MBD3L5A6NJ08 208 aaPredicted RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 FIGNL2A6NMB9 653 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 CA11O75493 328 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 CRTAPO75718 401 aaPredicted RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 HOXC12P31275 282 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 UCNP55089 124 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 RRAS2P62070 204 aaPredicted RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 ZMYND11Q15326 602 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 RBMS2Q15434 407 aaKnown RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 TBC1D28Q2M2D7 210 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 C1QTNF12Q5T7M4 302 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 STEAP1BQ6NZ63 245 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 GLCCI1Q86VQ1 547 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 SPACA3Q8IXA5 215 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 C17orf78Q8N4C9 275 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 MBD3L2Q8NHZ7 208 aaPredicted RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 RAB3CQ96E17 227 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 MRPS24Q96EL2 167 aaKnown RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 NKX3-1Q99801 234 aaPredicted RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 C20orf85Q9H1P6 137 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 PLSCR4Q9NRQ2 329 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 GPR173Q9NS66 373 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 ING4Q9UNL4 249 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 NDUFB6O95139 128 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 CST4P01036 141 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 PTHLHP12272 177 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 HIST1H1DP16402 221 aaKnown RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 COX5AP20674 150 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 VEGFCP49767 419 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 CCR6P51684 374 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 SLC22A6Q4U2R8 563 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 FAM180AQ6UWF9 173 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 UNQ6126/PRO20091Q6UXV3 157 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 ASCL4Q6XD76 172 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 ZSCAN4Q8NAM6 433 aaPredicted RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 PXT1Q8NFP0 134 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 OR5M9Q8NGP3 310 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 IL36GQ9NZH8 169 aa14.87□□□□□ -0.03
LTBR-207ENST00000539925 MRPL15Q9P015 296 aaKnown RBP14.87□□□□□ -0.03
LTBR-207ENST00000539925 TRAV6A0A075B6T7 132 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 SERPINE3A8MV23 424 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 K7ENP7 123 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 ICMTO60725 284 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 CD74P04233 296 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 TMEM225BP0DP42 221 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 CCNOP22674 350 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 IGHV1-2P23083 117 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 TUBG1P23258 451 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 KIR2DL2P43627 348 aaPredicted RBP14.86□□□□□ -0.03
LTBR-207ENST00000539925 MECP2P51608 486 aaKnown RBP14.86□□□□□ -0.03
LTBR-207ENST00000539925 GNG2P59768 71 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 ZP1P60852 638 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 TNK1Q13470 666 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 P2RY6Q15077 328 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 MOGAT2Q3SYC2 334 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 HIKESHIQ53FT3 197 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 METTL11BQ5VVY1 283 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 SFRP4Q6FHJ7 346 aaPredicted RBP14.86□□□□□ -0.03
LTBR-207ENST00000539925 ZNF782Q6ZMW2 699 aaPredicted RBP14.86□□□□□ -0.03
LTBR-207ENST00000539925 CNEP1R1Q8N9A8 125 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 C9orf106Q8NAJ2 232 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 SLC30A7Q8NEW0 376 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 OR4C16Q8NGL9 310 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 SLC25A21Q9BQT8 299 aaPredicted RBP14.86□□□□□ -0.03
LTBR-207ENST00000539925 TRAF4Q9BUZ4 470 aaPredicted RBP14.86□□□□□ -0.03
LTBR-207ENST00000539925 TUBG2Q9NRH3 451 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 MYEF2Q9P2K5 600 aaKnown RBP14.86□□□□□ -0.03
LTBR-207ENST00000539925 EIF3KQ9UBQ5 218 aaKnown RBP14.86□□□□□ -0.03
LTBR-207ENST00000539925 LHX6Q9UPM6 363 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 WASF3Q9UPY6 502 aa14.86□□□□□ -0.03
LTBR-207ENST00000539925 A0A1B0GUH1 482 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 TMEM235A6NFC5 223 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 ZNF736B4DX44 427 aaPredicted RBP14.85□□□□□ -0.03
LTBR-207ENST00000539925 RAB3DO95716 219 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 CSTBP04080 98 aaKnown RBP14.85□□□□□ -0.03
LTBR-207ENST00000539925 MGMTP16455 207 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 PER3P56645 1201 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 GUCA2AQ02747 115 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 ACTBL2Q562R1 376 aa14.85□□□□□ -0.03
LTBR-207ENST00000539925 CD276Q5ZPR3 534 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms