RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 NIPSNAP1Q9BPW8 284 aa12.64□□□□□ -0.39
UBE3B-211ENST00000539843 YY1AP1Q9H869 796 aa12.64□□□□□ -0.39
UBE3B-211ENST00000539843 C5orf63A6NC05 138 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 GPR137BO60478 399 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 CSNK2BP67870 215 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 PRDX4Q13162 271 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 SLC35D3Q5M8T2 416 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 DHRS7BQ6IAN0 325 aaPredicted RBP12.63□□□□□ -0.39
UBE3B-211ENST00000539843 PLBD1Q6P4A8 553 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 KRT77Q7Z794 578 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 COMMD2Q86X83 199 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 PDZD9Q8IXQ8 264 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 ZDHHC23Q8IYP9 409 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 IQCF1Q8N6M8 205 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 OTOSQ8NHW6 89 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 PIGCQ92535 297 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 ITFG2Q969R8 447 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 ITPKCQ96DU7 683 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 FEVQ99581 238 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 TLNRD1Q9H1K6 362 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 MED20Q9H944 212 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 HAO2Q9NYQ3 351 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 LAMP5Q9UJQ1 280 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 RHBDD3Q9Y3P4 386 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 RNF114Q9Y508 228 aa12.63□□□□□ -0.39
UBE3B-211ENST00000539843 A0A0U1RQK1 487 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 A0A1W2PQ09 198 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 ZNF850A8MQ14 1090 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 IER3P46695 156 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 PSMA6P60900 246 aaKnown RBP12.62□□□□□ -0.39
UBE3B-211ENST00000539843 GMFBP60983 142 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 NCR3LG1Q68D85 454 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 KCTD18Q6PI47 426 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-211ENST00000539843 METAP1DQ6UB28 335 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-211ENST00000539843 THAP5Q7Z6K1 395 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 WDR86Q86TI4 376 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 FAM216BQ8N7L0 139 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 CCDC197Q8NCU1 140 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 TAF15Q92804 592 aaKnown RBP eCLIP12.62□□□□□ -0.39
UBE3B-211ENST00000539843 RNF170Q96K19 258 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 PKP2Q99959 881 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 CHID1Q9BWS9 393 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 SIRT7Q9NRC8 400 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 VNN3Q9NY84 501 aa12.62□□□□□ -0.39
UBE3B-211ENST00000539843 PDP1Q9P0J1 537 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-211ENST00000539843 SLC25A10Q9UBX3 287 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-211ENST00000539843 ACOT8O14734 319 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 CST4P01036 141 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 IGHV4-59P01825 116 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 NDUFB7P17568 137 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 ANOS1P23352 680 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 MAP2K3P46734 347 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 GYS2P54840 703 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 DEFA6Q01524 100 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 GINS1Q14691 196 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 OCLNQ16625 522 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 MIDNQ504T8 468 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 ATPAF1Q5TC12 328 aaPredicted RBP12.61□□□□□ -0.39
UBE3B-211ENST00000539843 LCN1P1Q5VSP4 162 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 STUMQ69YW2 141 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 PRSS45Q7RTY3 260 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 C11orf53Q8IXP5 236 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 LY6G5BQ8NDX9 201 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 OR5R1Q8NH85 324 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 OR5P3Q8WZ94 311 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 DCTN5Q9BTE1 182 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 MROQ9BYG7 248 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 PRRG3Q9BZD7 231 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 MMP27Q9H306 513 aa12.61□□□□□ -0.39
UBE3B-211ENST00000539843 ZNF816-ZNF321PA0A0X1KG74 233 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 A0A1W2PPH5 198 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 ACOD1A6NK06 481 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 AQP12BA6NM10 295 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 M0R1W7 72 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 GSC2O15499 205 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 KCNAB3O43448 404 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 SELENOFO60613 162 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 OSMP13725 252 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 ANXA8P13928 327 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 GLRA1P23415 457 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 GABRA2P47869 451 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 GNG3P63215 75 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 AQP12AQ8IXF9 295 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 ZNF671Q8TAW3 534 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 DNAJC9Q8WXX5 260 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 RPL3LQ92901 407 aaKnown RBP12.6□□□□□ -0.39
UBE3B-211ENST00000539843 RAB3IPQ96QF0 476 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-211ENST00000539843 CITED1Q99966 193 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 METTL8Q9H825 291 aaKnown RBP12.6□□□□□ -0.39
UBE3B-211ENST00000539843 TCF7L1Q9HCS4 588 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 SNTG1Q9NSN8 517 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 NLKQ9UBE8 527 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 VPREB3Q9UKI3 123 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 TMEM14AQ9Y6G1 99 aa12.6□□□□□ -0.39
UBE3B-211ENST00000539843 ANKRD61A6NGH8 418 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 NPFFO15130 113 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 AKR7A2O43488 359 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 ATP6V1B1P15313 513 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 TGFBR2P37173 567 aa12.59□□□□□ -0.39
UBE3B-211ENST00000539843 TGM4P49221 684 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms