RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 UBE2UQ5VVX9 321 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 DMKNQ6E0U4 476 aaPredicted RBP13.22□□□□□ -0.29
DDB1-216ENST00000539739 C20orf204Q6ZNR8 217 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 KCTD8Q6ZWB6 473 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 DOK3Q7L591 496 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 LRP11Q86VZ4 500 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 ZFP41Q8N8Y5 198 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 CCDC54Q8NEL0 328 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 UFD1Q92890 307 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 FAM71F1Q96KD3 344 aaPredicted RBP13.22□□□□□ -0.29
DDB1-216ENST00000539739 LYZL4Q96KX0 146 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 MGLLQ99685 303 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 PDCD1LG2Q9BQ51 273 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 PLEKHF2Q9H8W4 249 aa13.22□□□□□ -0.29
DDB1-216ENST00000539739 PURGQ9UJV8 347 aaKnown RBP13.22□□□□□ -0.29
DDB1-216ENST00000539739 hCG_38984A0A1B0GV85 526 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 LOC390937A0A1W2PQ73 354 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 PLPP2O43688 288 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 ZFPL1O95159 310 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 IGLV3-1P01715 115 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 ZNF182P17025 639 aaPredicted RBP13.21□□□□□ -0.29
DDB1-216ENST00000539739 ACHEP22303 614 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 MAP2K3P46734 347 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 GSK3AP49840 483 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 GPR50Q13585 617 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 EFNB3Q15768 340 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 NKPD1Q17RQ9 610 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 ZFP69Q49AA0 526 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 OR2T2Q6IF00 324 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 RDH10Q8IZV5 341 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 RPS4Y2Q8TD47 263 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 TMEM246Q9BRR3 403 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 TAAR3PQ9P1P4 343 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 HHLA2Q9UM44 414 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 ZNF281Q9Y2X9 895 aa13.21□□□□□ -0.29
DDB1-216ENST00000539739 SIRT4Q9Y6E7 314 aaPredicted RBP13.21□□□□□ -0.29
DDB1-216ENST00000539739 LOC107986453A0A1B0GWG9 222 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 PLSCR5A0PG75 271 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 CD300LBA8K4G0 201 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 DHRS3O75911 302 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 CD1AP06126 327 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 BMP4P12644 408 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 CCL1P22362 96 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 PSMB9P28065 219 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 LIPAP38571 399 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 NEDD8Q15843 81 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 ARMCX4Q5H9R4 360 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 FTMTQ8N4E7 242 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 CSNK2A3Q8NEV1 391 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 SEMA6DQ8NFY4 1073 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 LRRC20Q8TCA0 184 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 GHSRQ92847 366 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 ZC4H2Q9NQZ6 224 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 CBLN4Q9NTU7 201 aa13.21□□□□□ -0.3
DDB1-216ENST00000539739 CGGBP1Q9UFW8 167 aaPredicted RBP13.21□□□□□ -0.3
DDB1-216ENST00000539739 A0A1B0GTI1 187 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 DHRS7CA6NNS2 312 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 IQCF6A8MYZ5 107 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 DANCRP0C864 163 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 PRSS12P56730 875 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 SNRPD2P62316 118 aaKnown RBP13.2□□□□□ -0.3
DDB1-216ENST00000539739 TPBGQ13641 420 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 OR8B8Q15620 311 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 LIPKQ5VXJ0 399 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 DTX2Q86UW9 622 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 OR5AS1Q8N127 324 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 MFSD4AQ8N468 514 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 PLPP7Q8NBV4 271 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 OR56B2PQ8NGI1 322 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 OR5H6Q8NGV6 325 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 SOX7Q9BT81 388 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 NARFLQ9H6Q4 476 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 PLEKHA1Q9HB21 404 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 CYSLTR2Q9NS75 346 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 LAMP3Q9UQV4 416 aa13.2□□□□□ -0.3
DDB1-216ENST00000539739 H3BSH0 61 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 TOR1AO14656 332 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 NOS1APO75052 506 aaPredicted RBP13.19□□□□□ -0.3
DDB1-216ENST00000539739 CPEP16870 476 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 DOC2BQ14184 412 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 DGUOKQ16854 277 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 SWI5Q1ZZU3 235 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 C4orf46Q504U0 113 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 ZMAT1Q5H9K5 638 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 CDH26Q8IXH8 852 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 MS4A15Q8N5U1 240 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 BHLHE23Q8NDY6 225 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 OR8G5Q8NG78 346 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 OR6F1Q8NGZ6 308 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 GPR148Q8TDV2 347 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 DYNLRB1Q9NP97 96 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 PPP1R14DQ9NXH3 145 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 MYEF2Q9P2K5 600 aaKnown RBP13.19□□□□□ -0.3
DDB1-216ENST00000539739 EDARQ9UNE0 448 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 PIGLQ9Y2B2 252 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 PMF1-BGLAPU3KQ54 211 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 V9GYS6 101 aa13.19□□□□□ -0.3
DDB1-216ENST00000539739 ANKRD30BLA7E2S9 258 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 M0R233 179 aa13.18□□□□□ -0.3
DDB1-216ENST00000539739 INMTO95050 263 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms