RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 PCP4L1A6NKN8 68 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 METTL12A8MUP2 240 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 K7EPK0 472 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 KCNAB3O43448 404 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF354AO60765 605 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-209ENST00000539584 MED6O75586 246 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 RAD51DO75771 328 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 CRYBA1P05813 215 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 CTSDP07339 412 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-209ENST00000539584 SFTA3P0C7M3 94 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 RPL35P42766 123 aaKnown RBP11.69□□□□□ -0.54
UBE3B-209ENST00000539584 MEOX2P50222 304 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF133P52736 654 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-209ENST00000539584 RAB30Q15771 203 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 TMPPEQ6ZT21 453 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 SGPP2Q8IWX5 399 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 FAM71E2Q8N5Q1 922 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 UBAC2Q8NBM4 344 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 NFAM1Q8NET5 270 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-209ENST00000539584 SLC39A7Q92504 469 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 BANF2Q9H503 90 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 PNRC2Q9NPJ4 139 aaKnown RBP11.69□□□□□ -0.54
UBE3B-209ENST00000539584 OR2S2Q9NQN1 319 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 SLCO1B1Q9Y6L6 691 aa11.69□□□□□ -0.54
UBE3B-209ENST00000539584 MEX3AA1L020 520 aaKnown RBP11.68□□□□□ -0.54
UBE3B-209ENST00000539584 TRAF3IP2O43734 574 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-209ENST00000539584 LRP3O75074 770 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 S100A8P05109 93 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 FOLR1P15328 257 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 RPL12P30050 165 aaKnown RBP11.68□□□□□ -0.54
UBE3B-209ENST00000539584 DHPSP49366 369 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-209ENST00000539584 DLX2Q07687 328 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-209ENST00000539584 KISS1Q15726 138 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 DEFB133Q30KQ1 61 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 PLPPR5Q32ZL2 321 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 LANCL3Q6ZV70 420 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF283Q8N7M2 679 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 CADM4Q8NFZ8 388 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 FNDC9Q8TBE3 224 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 RXFP4Q8TDU9 374 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF501Q96CX3 271 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-209ENST00000539584 S100A13Q99584 98 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 SULT4A1Q9BR01 284 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 ST6GALNAC5Q9BVH7 336 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF768Q9H5H4 540 aaKnown RBP11.68□□□□□ -0.54
UBE3B-209ENST00000539584 FAM212BQ9NTI7 297 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-209ENST00000539584 HDGFL3Q9Y3E1 203 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 TIMM10BQ9Y5J6 103 aa11.68□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF726A6NNF4 738 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 PRSS44E7EML9 344 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 H3BML4 177 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 DEDDO75618 318 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 SPP1P10451 314 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 GLRA1P23415 457 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 PMELP40967 661 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 EIF1P41567 113 aaKnown RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 GUCA1AP43080 201 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 SHHQ15465 462 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 SWI5Q1ZZU3 235 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 RPL7L1Q6DKI1 246 aaKnown RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 RHBDD2Q6NTF9 364 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 WDR74Q6RFH5 385 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 RABEPKQ7Z6M1 372 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 PRSS58Q8IYP2 241 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 TSTD1Q8NFU3 115 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 STT3BQ8TCJ2 826 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 SFT2D1Q8WV19 159 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 ROBO4Q8WZ75 1007 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 CPNE2Q96FN4 548 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 ZC3H10Q96K80 434 aaKnown RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 FAM71F1Q96KD3 344 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 ADAT1Q9BUB4 502 aaKnown RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 PECRQ9BY49 303 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 ESRP2Q9H6T0 727 aaKnown RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 KLRF1Q9NZS2 232 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 FBXO9Q9UK97 447 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 IGKV1-9A0A0C4DH69 117 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 SHISA7A6NL88 538 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 COLCA2A8K830 154 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 TOX3O15405 576 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 FARS2O95363 451 aaKnown RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 SEC11BP0C7V7 166 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF708P17019 499 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 ZNF43P17038 809 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 BLVRBP30043 206 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 RAB5CP51148 216 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 OR1D5P58170 312 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 S100A10P60903 97 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 RBM39Q14498 530 aaKnown RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 IAH1Q2TAA2 248 aaPredicted RBP11.67□□□□□ -0.54
UBE3B-209ENST00000539584 ANKRD37Q7Z713 158 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 SULF2Q8IWU5 870 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 OR9K2Q8NGE7 335 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 KIRREL1Q96J84 757 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 SPACA5Q96QH8 159 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 PRRX2Q99811 253 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 FGF21Q9NSA1 209 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 GSKIPQ9P0R6 139 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 KCNIP3Q9Y2W7 256 aa11.67□□□□□ -0.54
UBE3B-209ENST00000539584 PCDHGA1Q9Y5H4 931 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms