RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 BTN1A1Q13410 526 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 VAX1Q5SQQ9 334 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF385CQ66K41 422 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 DOK3Q7L591 496 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 ABHD12BQ7Z5M8 362 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 RELL2Q8NC24 303 aaPredicted RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 TERB2Q8NHR7 220 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 MRPS24Q96EL2 167 aaKnown RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 STRADBQ9C0K7 418 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 WDR13Q9H1Z4 485 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 PNRC2Q9NPJ4 139 aaKnown RBP12.82□□□□□ -0.36
CDCA3-207ENST00000538862 GPR84Q9NQS5 396 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 LOXL2Q9Y4K0 774 aa12.82□□□□□ -0.36
CDCA3-207ENST00000538862 PTPRQQ9UMZ3 2332 aa12.81□□□□□ -0.36
CDCA3-207ENST00000538862 CEACAM18A8MTB9 384 aa12.81□□□□□ -0.36
CDCA3-207ENST00000538862 OR2J2O76002 312 aa12.81□□□□□ -0.36
CDCA3-207ENST00000538862 CYC1P08574 325 aa12.81□□□□□ -0.36
CDCA3-207ENST00000538862 HIST1H1DP16402 221 aaKnown RBP12.81□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF43P17038 809 aa12.81□□□□□ -0.36
CDCA3-207ENST00000538862 LUMP51884 338 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-207ENST00000538862 GRB2P62993 217 aaKnown RBP12.81□□□□□ -0.36
CDCA3-207ENST00000538862 CYCSP99999 105 aaKnown RBP12.81□□□□□ -0.36
CDCA3-207ENST00000538862 LRRC37A5PQ49AS3 106 aa12.81□□□□□ -0.36
CDCA3-207ENST00000538862 ARRDC1Q8N5I2 433 aa12.81□□□□□ -0.36
CDCA3-207ENST00000538862 INO80EQ8NBZ0 244 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-207ENST00000538862 ADAD2Q8NCV1 583 aaKnown RBP12.81□□□□□ -0.36
CDCA3-207ENST00000538862 RAB3CQ96E17 227 aa12.81□□□□□ -0.36
CDCA3-207ENST00000538862 SPSB2Q99619 263 aa12.81□□□□□ -0.36
CDCA3-207ENST00000538862 NICN1Q9BSH3 213 aa12.81□□□□□ -0.36
CDCA3-207ENST00000538862 BARX1Q9HBU1 254 aaPredicted RBP12.81□□□□□ -0.36
CDCA3-207ENST00000538862 ASH2LQ9UBL3 628 aa12.81□□□□□ -0.36
CDCA3-207ENST00000538862 A0A0A6YYD4 124 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 A0A1W2PNR3 127 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 AQP7P3A6NL99 342 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF726A6NNF4 738 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 SULT2B1O00204 365 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 CDC14BO60729 498 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 PMP2P02689 132 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 QDPRP09417 244 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 NR2C1P13056 603 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF17P17021 662 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 AKR1C4P17516 323 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 VAMP1P23763 118 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 CTSSP25774 331 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 CDAP32320 146 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 EIF2S3P41091 472 aaKnown RBP12.8□□□□□ -0.36
CDCA3-207ENST00000538862 PAN3Q58A45 887 aaKnown RBP12.8□□□□□ -0.36
CDCA3-207ENST00000538862 IGSF11Q5DX21 431 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 COMMD2Q86X83 199 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 STPG2Q8N412 459 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 FADS6Q8N9I5 356 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 OR56B1Q8NGI3 324 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 SSC4DQ8WTU2 575 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 SPACA9Q96E40 222 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-207ENST00000538862 OCSTAMPQ9BR26 566 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 CRB3Q9BUF7 120 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF471Q9BX82 626 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-207ENST00000538862 TMEM59Q9BXS4 323 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 SLC26A1Q9H2B4 701 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 FN3KRPQ9HA64 309 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 RALYQ9UKM9 306 aaKnown RBP12.8□□□□□ -0.36
CDCA3-207ENST00000538862 LOC400499M0QZD8 3231 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 TSPAN4O14817 238 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 SMAD9O15198 467 aaKnown RBP12.8□□□□□ -0.36
CDCA3-207ENST00000538862 RER1O15258 196 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 MPIG6BO95866 241 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 CRHP06850 196 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 JMJD7P0C870 316 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 CCL4P13236 92 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 CNR1P21554 472 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 CX3CR1P49238 355 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 INPP5JQ15735 1006 aaPredicted RBP12.8□□□□□ -0.36
CDCA3-207ENST00000538862 TMEM128Q5BJH2 165 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 PLAC9Q5JTB6 97 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 KCTD9Q7L273 389 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 TMEM104Q8NE00 496 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 TMEM185AQ8NFB2 350 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 CASTOR1Q8WTX7 329 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 INTS12Q96CB8 462 aaKnown RBP12.8□□□□□ -0.36
CDCA3-207ENST00000538862 TMEM41AQ96HV5 264 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 SCGB3A2Q96PL1 93 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 RASL10BQ96S79 203 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 URM1Q9BTM9 101 aaKnown RBP12.8□□□□□ -0.36
CDCA3-207ENST00000538862 NMES1Q9C002 83 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF319Q9P2F9 582 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 GPR132Q9UNW8 380 aa12.8□□□□□ -0.36
CDCA3-207ENST00000538862 MGAQ8IWI9 3026 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 TRBV6-7A0A0A0MS04 114 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 A0A0B4J2A0 478 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 ZNF814B7Z6K7 855 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 SOCS1O15524 211 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 HCKP08631 526 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 PSMB6P28072 239 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 OR3A4PP47883 348 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 TMEM50BP56557 158 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 LSM6P62312 80 aaKnown RBP12.79□□□□□ -0.36
CDCA3-207ENST00000538862 SLC35A1P78382 337 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 MICBQ29980 383 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 CARD17Q5XLA6 110 aa12.79□□□□□ -0.36
CDCA3-207ENST00000538862 RNF144BQ7Z419 303 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms