RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 WDR82Q6UXN9 313 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 CSNK2A3Q8NEV1 391 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 ITPKCQ96DU7 683 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 SEH1LQ96EE3 360 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 OR8B4Q96RC9 309 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 PCGF1Q9BSM1 259 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 OSBPL10Q9BXB5 764 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 FGF23Q9GZV9 251 aaPredicted RBP12.42□□□□□ -0.42
RAB40B-202ENST00000538809 TLNRD1Q9H1K6 362 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 ADGRL4Q9HBW9 690 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 TRIM36Q9NQ86 728 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 HAO2Q9NYQ3 351 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 ENOPH1Q9UHY7 261 aa12.42□□□□□ -0.42
RAB40B-202ENST00000538809 ACOD1A6NK06 481 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 ZNF850A8MQ14 1090 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.41□□□□□ -0.42
RAB40B-202ENST00000538809 SRSF10O75494 262 aaKnown RBP12.41□□□□□ -0.42
RAB40B-202ENST00000538809 PRTN3P24158 256 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 CFHR2P36980 270 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 AWAT1Q58HT5 328 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 TEX36Q5VZQ5 186 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 KCTD18Q6PI47 426 aaPredicted RBP12.41□□□□□ -0.42
RAB40B-202ENST00000538809 ZNF679Q8IYX0 411 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 C3orf56Q8N813 242 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 PYDC1Q8WXC3 89 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 ASB17Q8WXJ9 295 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 ST8SIA4Q92187 359 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 CNN2Q99439 309 aaKnown RBP12.41□□□□□ -0.42
RAB40B-202ENST00000538809 MICU1Q9BPX6 476 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 RTL8AQ9BWD3 113 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 ZNF391Q9UJN7 358 aa12.41□□□□□ -0.42
RAB40B-202ENST00000538809 A0A0U1RQV5 110 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 SAC3D1A6NKF1 404 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 SLC22A31A6NKX4 558 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 ANXA2P2A6NMY6 339 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 E9PQ18 207 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 DVL1O14640 695 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 CDIPTO14735 213 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 TMPRSS2O15393 492 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 ZNF254O75437 659 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 CST4P01036 141 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 MTNR1AP48039 350 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 IL5RAQ01344 420 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 KPNB1Q14974 876 aaKnown RBP12.4□□□□□ -0.42
RAB40B-202ENST00000538809 WDR38Q5JTN6 314 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 CCDC121Q6ZUS5 278 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 C9orf139Q6ZV77 190 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 KCTD8Q6ZWB6 473 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 FTMTQ8N4E7 242 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 FAM216BQ8N7L0 139 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 FAM81AQ8TBF8 368 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 HPSE2Q8WWQ2 592 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 PIGCQ92535 297 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 TAF15Q92804 592 aaKnown RBP eCLIP12.4□□□□□ -0.42
RAB40B-202ENST00000538809 RPL3LQ92901 407 aaKnown RBP12.4□□□□□ -0.42
RAB40B-202ENST00000538809 IL4I1Q96RQ9 567 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 TBX15Q96SF7 602 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 CCL13Q99616 98 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 PKP2Q99959 881 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 RNPEPL1Q9HAU8 725 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 MPC1Q9Y5U8 109 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 TMEM14AQ9Y6G1 99 aa12.4□□□□□ -0.42
RAB40B-202ENST00000538809 TMEM269A0A1B0GVZ9 245 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 ZNF879B4DU55 563 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 NDUFA2O43678 99 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 TOX4O94842 621 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 TFF1P04155 84 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 HKR1P10072 659 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 MMP9P14780 707 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 MFGE8Q08431 387 aaPredicted RBP12.39□□□□□ -0.43
RAB40B-202ENST00000538809 SLC9A3R2Q15599 337 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 SNCBQ16143 134 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 MICBQ29980 383 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 DEFB112Q30KQ8 113 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 FAM76BQ5HYJ3 339 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 GPR157Q5UAW9 335 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 CD276Q5ZPR3 534 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 BTN2A1Q7KYR7 527 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 COMMD2Q86X83 199 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 GID4Q8IVV7 300 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 SLC35F2Q8IXU6 374 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 GALNT4Q8N4A0 578 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 OR5P3Q8WZ94 311 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 MNTQ99583 582 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 RBM4BQ9BQ04 359 aaKnown RBP12.39□□□□□ -0.43
RAB40B-202ENST00000538809 MROQ9BYG7 248 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 PBOV1Q9GZY1 135 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 ZMAT3Q9HA38 289 aaKnown RBP12.39□□□□□ -0.43
RAB40B-202ENST00000538809 CLN6Q9NWW5 311 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 NUFIP1Q9UHK0 495 aaKnown RBP12.39□□□□□ -0.43
RAB40B-202ENST00000538809 IKZF2Q9UKS7 526 aa12.39□□□□□ -0.43
RAB40B-202ENST00000538809 SRRM5B3KS81 715 aa12.38□□□□□ -0.43
RAB40B-202ENST00000538809 ALPLP05186 524 aa12.38□□□□□ -0.43
RAB40B-202ENST00000538809 RNASE1P07998 156 aaKnown RBP12.38□□□□□ -0.43
RAB40B-202ENST00000538809 SELLP14151 372 aa12.38□□□□□ -0.43
RAB40B-202ENST00000538809 RIDAP52758 137 aaKnown RBP12.38□□□□□ -0.43
RAB40B-202ENST00000538809 CXCR4P61073 352 aa12.38□□□□□ -0.43
RAB40B-202ENST00000538809 DMRTC1Q5HYR2 192 aa12.38□□□□□ -0.43
RAB40B-202ENST00000538809 ZNF322Q6U7Q0 402 aaPredicted RBP12.38□□□□□ -0.43
RAB40B-202ENST00000538809 ZDHHC23Q8IYP9 409 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms