RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 DDOSTP39656 456 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 BMXP51813 675 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 FAM3AP98173 230 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 BLMHQ13867 455 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 ATPAF1Q5TC12 328 aaPredicted RBP11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 FOXB2Q5VYV0 432 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 HCP5Q6MZN7 132 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 C11orf87Q6NUJ2 197 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 CRIP3Q6Q6R5 217 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 SPSB4Q96A44 273 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 REEP6Q96HR9 211 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 AJUBAQ96IF1 538 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 C7orf34Q96L11 122 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 DHRS1Q96LJ7 313 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 KCNJ15Q99712 375 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 KCTD14Q9BQ13 255 aaPredicted RBP11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 ARL2BPQ9Y2Y0 163 aa11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 SF3B6Q9Y3B4 125 aaKnown RBP11.39□□□□□ -0.59
SMARCA4-206ENST00000538456 TENM3Q9P273 2699 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 ZNF878C9JN71 531 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 AKR7A2O43488 359 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 IDH3BO43837 385 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 GADD45GO95257 159 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 CX3CR1P49238 355 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 SPIBQ01892 262 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 ZSCAN26Q16670 478 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 OR4F17Q8NGA8 305 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 OR2T4Q8NH00 348 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 RPL3LQ92901 407 aaKnown RBP11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 RAB3IPQ96QF0 476 aaPredicted RBP11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 OR4F4Q96R69 305 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 TLNRD1Q9H1K6 362 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 DNAJC27Q9NZQ0 273 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 RHBDD3Q9Y3P4 386 aa11.38□□□□□ -0.59
SMARCA4-206ENST00000538456 hCG_38984A0A1B0GV85 526 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 MEGF11A6BM72 1044 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 EBAG9O00559 213 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 GYPBP06028 91 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 GSK3AP49840 483 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 ENTPD1P49961 510 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 EMX1Q04741 257 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 ZNF788Q6ZQV5 615 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 KCTD8Q6ZWB6 473 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 FAM57BQ71RH2 274 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 NDUFA11Q86Y39 141 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 FAM185AQ8N0U4 392 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 ZNF511Q8NB15 262 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 OR5D13Q8NGL4 314 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 ANGPTL6Q8NI99 470 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 SGK3Q96BR1 496 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 MED30Q96HR3 178 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 CITED2Q99967 270 aaPredicted RBP11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 MICU1Q9BPX6 476 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 RTL8AQ9BWD3 113 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 DNTTIP1Q9H147 329 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 EGLN3Q9H6Z9 239 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 ZNF702PQ9H963 129 aa11.37□□□□□ -0.59
SMARCA4-206ENST00000538456 DHRS12A0PJE2 317 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 ANXA2P2A6NMY6 339 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 ZNF593O00488 134 aaPredicted RBP11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 SIGLEC5O15389 551 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 HSD11B1P28845 292 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 GABRA2P47869 451 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 CAV3P56539 151 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 MXRA7P84157 204 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 IL5RAQ01344 420 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 KLHL12Q53G59 568 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 PLA1AQ53H76 456 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 MKXQ8IYA7 352 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 ZNRF1Q8ND25 227 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 TMEM185AQ8NFB2 350 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 OR52L1Q8NGH7 329 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 RP9Q8TA86 221 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 OR5M11Q96RB7 305 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 HOPXQ9BPY8 73 aaPredicted RBP11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 MEGF9Q9H1U4 602 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 BRD7Q9NPI1 651 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 SERTAD4Q9NUC0 356 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 NLKQ9UBE8 527 aa11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 SAMD4AQ9UPU9 718 aaKnown RBP11.36□□□□□ -0.59
SMARCA4-206ENST00000538456 A0A1W2PRX2 142 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 OR2AT4A6NND4 320 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 ADARB2-AS1A8MUL3 147 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 ACAA1P09110 424 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 COX4I1P13073 169 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 IGLL1P15814 213 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 CD33P20138 364 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 COX7A1P24310 79 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 FMO3P31513 532 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 SLC15A1P46059 708 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 GSSP48637 474 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 NUDT2P50583 147 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 ZNF121P58317 390 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 SMIM11AP58511 58 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 GRB2P62993 217 aaKnown RBP11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 PRDX4Q13162 271 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 AANATQ16613 207 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 C8orf82Q6P1X6 216 aaPredicted RBP11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 LIAT1Q6ZQX7 453 aa11.35□□□□□ -0.59
SMARCA4-206ENST00000538456 SLC37A3Q8NCC5 494 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms