RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 LCN1P1Q5VSP4 162 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 FAHD1Q6P587 224 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 BCDIN3DQ7Z5W3 292 aaKnown RBP11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 COMMD2Q86X83 199 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 GALNT4Q8N4A0 578 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 FAM216BQ8N7L0 139 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 OR5T2Q8NGG2 359 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 DNAJC9Q8WXX5 260 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 UTP4Q969X6 686 aaKnown RBP11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 NRBF2Q96F24 287 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 RNF170Q96K19 258 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 WDFY2Q96P53 400 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 TBX15Q96SF7 602 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 TEAD3Q99594 435 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 PKP2Q99959 881 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 YIPF3Q9GZM5 350 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 NIPAL2Q9H841 368 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 SNTG1Q9NSN8 517 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 DNAJB11Q9UBS4 358 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 NBEAL1Q6ZS30 2694 aa11.83□□□□□ -0.52
RTN3P1-201ENST00000536295 TMEM269A0A1B0GVZ9 245 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 CLDN34H7C241 214 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 PRKYO43930 277 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 CST4P01036 141 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 MMP9P14780 707 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 KCTD18Q6PI47 426 aaPredicted RBP11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 PDZD9Q8IXQ8 264 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 ZDHHC23Q8IYP9 409 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 OR5K1Q8NHB7 308 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 HPSE2Q8WWQ2 592 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 OR5P3Q8WZ94 311 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 LHX4Q969G2 390 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 HIST1H2AAQ96QV6 131 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 MROQ9BYG7 248 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 FGF23Q9GZV9 251 aaPredicted RBP11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 TLNRD1Q9H1K6 362 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 WDR13Q9H1Z4 485 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 KRT84Q9NSB2 600 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 KAAG1Q9UBP8 84 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 IKZF2Q9UKS7 526 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
RTN3P1-201ENST00000536295 CENPVL3A0A0U1RRI6 287 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 TMEM210A6NLX4 147 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 PRR32B1ATL7 298 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 SRRM5B3KS81 715 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 AKR7A2O43488 359 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 ECDO95905 644 aaPredicted RBP11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 TFF1P04155 84 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 GPM6AP51674 278 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 BNIP1Q12981 228 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 DMRTC1Q5HYR2 192 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 CEP78Q5JTW2 689 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 C16orf87Q6PH81 154 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 SLC36A1Q7Z2H8 476 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 SCCPDHQ8NBX0 429 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 GATAD2BQ8WXI9 593 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 FAM71F1Q96KD3 344 aaPredicted RBP11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 CNN2Q99439 309 aaKnown RBP11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 PRRG3Q9BZD7 231 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 PBOV1Q9GZY1 135 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 SIRPDQ9H106 197 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 CNTD2Q9H8S5 307 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 ABCB9Q9NP78 766 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 FAM206AQ9NX38 181 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 HAO2Q9NYQ3 351 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 ONECUT1Q9UBC0 465 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 RPUSD1Q9UJJ7 312 aaKnown RBP11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 ZNF391Q9UJN7 358 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 GTF2A1LQ9UNN4 478 aa11.81□□□□□ -0.52
RTN3P1-201ENST00000536295 ZNF816-ZNF321PA0A0X1KG74 233 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 G3V2T6 193 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 NDUFB3O43676 98 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 SELLP14151 372 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 OMGP23515 440 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 EPHA2P29317 976 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 MAP2K3P46734 347 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 BPIFB3P59826 476 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 ESRRGP62508 458 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 MFGE8Q08431 387 aaPredicted RBP11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 PDCD1Q15116 288 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 ATP6AP1Q15904 470 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 STUMQ69YW2 141 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 DEGS2Q6QHC5 323 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 THAP5Q7Z6K1 395 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 TCEANCQ8N8B7 351 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 SGMS2Q8NHU3 365 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 OR51E1Q8TCB6 317 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 H1FXQ92522 213 aaKnown RBP11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 PPP1R14AQ96A00 147 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 C12orf43Q96C57 262 aaKnown RBP11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 OR8B4Q96RC9 309 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 ZNF747Q9BV97 191 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 UNKLQ9H9P5 680 aaKnown RBP11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 GPR84Q9NQS5 396 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 H2AFY2Q9P0M6 372 aaPredicted RBP11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 TMEM14AQ9Y6G1 99 aa11.8□□□□□ -0.52
RTN3P1-201ENST00000536295 IGHV1-69DA0A0B4J2H0 117 aa11.79□□□□□ -0.52
RTN3P1-201ENST00000536295 A0A0U1RQV5 110 aa11.79□□□□□ -0.52
RTN3P1-201ENST00000536295 NKX6-3A6NJ46 265 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms