RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 FUT9Q9Y231 359 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 KCNK6Q9Y257 313 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 LSM5Q9Y4Y9 91 aaKnown RBP3.31□□□□□ -1.88
MCF2-210ENST00000536274 MPDZO75970 2070 aa3.31□□□□□ -1.88
MCF2-210ENST00000536274 DOCK9Q9BZ29 2069 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 TRAV1-2A0A0B4J238 106 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 CENPVL1A0A0U1RR11 272 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 A0A1W2PNV4 684 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 VSTM5A8MXK1 200 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 G3V3Y1 287 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 RNASET2O00584 256 aaKnown RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 XRCC2O43543 280 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 ZNF207O43670 478 aaKnown RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 CLDN7O95471 211 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 SLC16A8O95907 504 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 UMODP07911 640 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 FURINP09958 794 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 C8orf89P0DMQ9 161 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 EPCAMP16422 314 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 AKT2P31751 481 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 THPOP40225 353 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 MANFP55145 182 aaKnown RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 TAS2R38P59533 333 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 SIRPAP78324 504 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 EXOSC7Q15024 291 aaKnown RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 CDK5R1Q15078 307 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 EXT1Q16394 746 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 MS4A13Q5J8X5 152 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 FCRL6Q6DN72 434 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 WBP2NLQ6ICG8 309 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 WDR74Q6RFH5 385 aaPredicted RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 MED25Q71SY5 747 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 LYG2Q86SG7 212 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 CSNK1A1LQ8N752 337 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 ZNF709Q8N972 641 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 ZFP62Q8NB50 900 aaPredicted RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 OR5T1Q8NG75 326 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 OR2T33Q8NG76 320 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 OR5AR1Q8NGP9 310 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 OR2I1PQ8NGU4 316 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 OR4K13Q8NH42 304 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 TMEM239Q8WW34 195 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 MIB2Q96AX9 1013 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 PINX1Q96BK5 328 aaKnown RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 TSSK2Q96PF2 358 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 MACROD1Q9BQ69 325 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 NICN1Q9BSH3 213 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 MEGF9Q9H1U4 602 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 GSX1Q9H4S2 264 aaPredicted RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 MYNNQ9NPC7 610 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 SIRT3Q9NTG7 399 aaPredicted RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 OBP2AQ9NY56 170 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 CKLFQ9UBR5 152 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 CGGBP1Q9UFW8 167 aaPredicted RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 SLC5A6Q9Y289 635 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 TECTAO75443 2155 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 CFAP54Q96N23 3096 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 NPIPA5A0A0B4J1W7 369 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 KIR2DL5BA0A0G2JN68 375 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 KIR2DL5BA0A0G2JPC4 375 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 A0A1W2PR80 420 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 GRIFINA4D1Z8 144 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 E5RGE8 158 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 TGFBR3LH3BV60 316 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 M0QZK8 103 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 COCHO43405 550 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 ARL6IP5O75915 188 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 ZNF205O95201 554 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 CSF1P09603 554 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 HNRNPA1P09651 372 aaKnown RBP eCLIP3.3□□□□□ -1.88
MCF2-210ENST00000536274 HKR1P10072 659 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 CTSAP10619 480 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 SRFP11831 508 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 DGKAP23743 735 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 HSD11B1P28845 292 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 TIA1P31483 386 aaKnown RBP eCLIP3.3□□□□□ -1.88
MCF2-210ENST00000536274 FCGR2CP31995 323 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 MAS1LP35410 378 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 PTGER3P43115 390 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 PPICP45877 212 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 CAPZBP47756 277 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 IDH3GP51553 393 aaPredicted RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 BIDP55957 195 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 GFRA1P56159 465 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 TMEM33P57088 247 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 KLF3P57682 345 aaPredicted RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 PMPCAQ10713 525 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 FUT5Q11128 374 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 ENDOGQ14249 297 aaKnown RBP3.3□□□□□ -1.88
MCF2-210ENST00000536274 HNF4GQ14541 408 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 OCIAD2Q56VL3 154 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 COL5A1-AS1Q5SY13 56 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 MFSD12Q6NUT3 480 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 MED27Q6P2C8 311 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 PLXDC2Q6UX71 529 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 KIR2DL5AQ8N109 375 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 TMEM156Q8N614 296 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 ADPRHL1Q8NDY3 354 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 OR10S1Q8NGN2 331 aa3.3□□□□□ -1.88
MCF2-210ENST00000536274 OR6K6Q8NGW6 343 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms