RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 RAB24Q969Q5 203 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 FAM3DQ96BQ1 224 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 NMNAT3Q96T66 252 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 WNT5BQ9H1J7 359 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 PCED1AQ9H1Q7 454 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 HAO2Q9NYQ3 351 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 HDGFL3Q9Y3E1 203 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 BLACEA4D250 179 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 NDUFB2O95178 105 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 ARRB1P49407 418 aaPredicted RBP12.42□□□□□ -0.42
LIG1-203ENST00000536218 FHL1Q13642 323 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 TOMM34Q15785 309 aaPredicted RBP12.42□□□□□ -0.42
LIG1-203ENST00000536218 ZNF584Q8IVC4 421 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 TMEM229BQ8NBD8 167 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 MFSD8Q8NHS3 518 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 NPRL2Q8WTW4 380 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 RASD2Q96D21 266 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 GALNT14Q96FL9 552 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 GTF2A1LQ9UNN4 478 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 CNTRLQ7Z7A1 2325 aa12.42□□□□□ -0.42
LIG1-203ENST00000536218 A0A087WUJ7 227 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 A0A1W2PPC1 479 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 PRR32B1ATL7 298 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 HCRTR2O43614 444 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 CXCL1P09341 107 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 TSPAN7P41732 249 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 SLC9A3R2Q15599 337 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 AWAT2Q6E213 333 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 H3BMH7 237 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 RAMP1O60894 148 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 PDGFBP01127 241 aaPredicted RBP12.41□□□□□ -0.42
LIG1-203ENST00000536218 IFI6P09912 130 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 ZNF735P0CB33 412 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 FGF7P21781 194 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 SULT1A2P50226 295 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 EIF5AP63241 154 aaKnown RBP12.41□□□□□ -0.42
LIG1-203ENST00000536218 FAM220AQ7Z4H9 259 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 MARCH3Q86UD3 253 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 PRR18Q8N4B5 295 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 OR2I1PQ8NGU4 316 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 PARP11Q9NR21 331 aa12.41□□□□□ -0.42
LIG1-203ENST00000536218 TGIF2-C20orf24A0A0A6YYL0 155 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 A6NNC1 897 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 MKRN2OSH3BPM6 223 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 ZNF354AO60765 605 aaPredicted RBP12.4□□□□□ -0.42
LIG1-203ENST00000536218 STK17BO94768 372 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 PTBP3O95758 552 aaKnown RBP12.4□□□□□ -0.42
LIG1-203ENST00000536218 DDAH2O95865 285 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 F13BP05160 661 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 SLC2A1P11166 492 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 IL12BP29460 328 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 RAB11BQ15907 218 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 D2HGDHQ8N465 521 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 PLPP7Q8NBV4 271 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 ZPLD1Q8TCW7 415 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 ZNF721Q8TF20 911 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 TSEN15Q8WW01 171 aaKnown RBP12.4□□□□□ -0.42
LIG1-203ENST00000536218 SLC46A1Q96NT5 459 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 SNHG12Q9BXW3 62 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 VN1R1Q9GZP7 353 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 PLA2G2EQ9NZK7 142 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 ZNF264O43296 627 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 PRH1P02810 166 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 FHITP49789 147 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.4□□□□□ -0.42
LIG1-203ENST00000536218 GUSBP11Q6P575 273 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 LINC00114Q6XXX2 140 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 THNSL2Q86YJ6 484 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 GPR137CQ8N3F9 429 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 LRFN5Q96NI6 719 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 TSSK2Q96PF2 358 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 ZNF587Q96SQ5 575 aaPredicted RBP12.4□□□□□ -0.42
LIG1-203ENST00000536218 NELFAQ9H3P2 528 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 POMT1Q9Y6A1 747 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 CEP192Q8TEP8 1941 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 TMEM265A0A087WTH1 108 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 MELTFP08582 738 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 MPZP25189 248 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 RAB1AP62820 205 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 SHBQ15464 509 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 SOHLH1Q5JUK2 328 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 ARHGAP11AQ6P4F7 1023 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 C5orf24Q7Z6I8 188 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 PNLDC1Q8NA58 520 aaKnown RBP12.4□□□□□ -0.42
LIG1-203ENST00000536218 Q8WTZ3 238 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 TMEM208Q9BTX3 173 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 METTL8Q9H825 291 aaKnown RBP12.4□□□□□ -0.42
LIG1-203ENST00000536218 CHRNA9Q9UGM1 479 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 HS3ST3B1Q9Y662 390 aa12.4□□□□□ -0.42
LIG1-203ENST00000536218 C2orf72A6NCS6 295 aa12.39□□□□□ -0.43
LIG1-203ENST00000536218 IL33O95760 270 aa12.39□□□□□ -0.43
LIG1-203ENST00000536218 TAGLN2P37802 199 aaKnown RBP12.39□□□□□ -0.43
LIG1-203ENST00000536218 GRK6P43250 576 aa12.39□□□□□ -0.43
LIG1-203ENST00000536218 SLC10A1Q14973 349 aa12.39□□□□□ -0.43
LIG1-203ENST00000536218 SLC22A6Q4U2R8 563 aa12.39□□□□□ -0.43
LIG1-203ENST00000536218 C9orf40Q8IXQ3 194 aa12.39□□□□□ -0.43
LIG1-203ENST00000536218 OR9K2Q8NGE7 335 aa12.39□□□□□ -0.43
LIG1-203ENST00000536218 CNTNAP3Q9BZ76 1288 aa12.39□□□□□ -0.43
LIG1-203ENST00000536218 FLVCR1Q9Y5Y0 555 aa12.39□□□□□ -0.43
LIG1-203ENST00000536218 IGKV1D-42A0A075B6H8 117 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms