RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 C12orf57Q99622 126 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 HS3ST3B1Q9Y662 390 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 KLF7O75840 302 aaPredicted RBP11.56□□□□□ -0.56
LDLR-203ENST00000535915 HOXB1P14653 301 aaPredicted RBP11.56□□□□□ -0.56
LDLR-203ENST00000535915 CTSSP25774 331 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 PTGFRP43088 359 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 ACTBL2Q562R1 376 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 OVCH2Q7RTZ1 564 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 HSD17B13Q7Z5P4 300 aaPredicted RBP11.56□□□□□ -0.56
LDLR-203ENST00000535915 INO80EQ8NBZ0 244 aaPredicted RBP11.56□□□□□ -0.56
LDLR-203ENST00000535915 AGBL5Q8NDL9 886 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 OR9K2Q8NGE7 335 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 OR5H2Q8NGV7 314 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 ZNF75AQ96N20 296 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 NAA11Q9BSU3 229 aaPredicted RBP11.56□□□□□ -0.56
LDLR-203ENST00000535915 PROK2Q9HC23 129 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 STMND1H3BQB6 276 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 MFNGO00587 321 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 ZIC3O60481 467 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 VAMP5O95183 116 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 FAHP16930 419 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 AMY2BP19961 511 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 TMEM128Q5BJH2 165 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 VAX1Q5SQQ9 334 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 C1QL2Q7Z5L3 287 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 ARRDC1Q8N5I2 433 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 OR10K1Q8NGX5 313 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 MAFAQ8NHW3 353 aaPredicted RBP11.56□□□□□ -0.56
LDLR-203ENST00000535915 M1APQ8TC57 530 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 ST6GALNAC5Q9BVH7 336 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 RASL12Q9NYN1 266 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 MBD2Q9UBB5 411 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 GPR160Q9UJ42 338 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 ANAPC10Q9UM13 185 aa11.56□□□□□ -0.56
LDLR-203ENST00000535915 WDFY4Q6ZS81 3184 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 NCKAP5O14513 1909 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 A0A1B0GW55 424 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 MASP2O00187 686 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 TNFSF11O14788 317 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 DHHO43323 396 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 DHRS3O75911 302 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 DUX4L2P0CJ85 424 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 DUX4L3P0CJ86 424 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 DUX4L4P0CJ87 422 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 DUX4L5P0CJ88 424 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 DUX4L6P0CJ89 424 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 DUX4L7P0CJ90 424 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 SERPINA2P20848 420 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 THBS4P35443 961 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 SERPINF1P36955 418 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 CSNK2A1P68400 391 aaPredicted RBP11.55□□□□□ -0.56
LDLR-203ENST00000535915 FLI1Q01543 452 aaPredicted RBP11.55□□□□□ -0.56
LDLR-203ENST00000535915 UBE2V2Q15819 145 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 RPS19BP1Q86WX3 136 aaKnown RBP11.55□□□□□ -0.56
LDLR-203ENST00000535915 PAQR8Q8TEZ7 354 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 NABP1Q96AH0 204 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 S100A13Q99584 98 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 OCSTAMPQ9BR26 566 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 PLEK2Q9NYT0 353 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 DUX4Q9UBX2 424 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 NSG1A0A0A6YYJ2 146 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 A0A0U1RQV5 110 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 DBX1A6NMT0 343 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 IGLV3-1P01715 115 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 CD63P08962 238 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 FCGR2AP12318 317 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 PRF1P14222 555 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 TMEM123Q8N131 208 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 CLRN3Q8NCR9 226 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 ZNF775Q96BV0 537 aaPredicted RBP11.55□□□□□ -0.56
LDLR-203ENST00000535915 ULBP2Q9BZM5 246 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 C5orf66Q9H5L9 145 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 ELL3Q9HB65 397 aaPredicted RBP11.55□□□□□ -0.56
LDLR-203ENST00000535915 CHMP1AQ9HD42 196 aaPredicted RBP11.55□□□□□ -0.56
LDLR-203ENST00000535915 GPR132Q9UNW8 380 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 PIGLQ9Y2B2 252 aa11.55□□□□□ -0.56
LDLR-203ENST00000535915 CCDC163A0A0D9SF12 145 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 PATE3B3GLJ2 98 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 YKT6O15498 198 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 KCNAB3O43448 404 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 DBHP09172 617 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 PI3P19957 117 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 PSMB6P28072 239 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 BLVRBP30043 206 aaPredicted RBP11.54□□□□□ -0.56
LDLR-203ENST00000535915 OR3A2P47893 321 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 GHRLQ9UBU3 117 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 V9GYS6 101 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 A0A0J9YW62 118 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 F5H0A9 414 aaPredicted RBP11.54□□□□□ -0.56
LDLR-203ENST00000535915 LINC01387J3KSC0 135 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 M0R135 149 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 CRHP06850 196 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 ZNF84P51523 738 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 SLC9A3R2Q15599 337 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 RSPO4Q2I0M5 234 aaPredicted RBP11.54□□□□□ -0.56
LDLR-203ENST00000535915 RSPO1Q2MKA7 263 aaPredicted RBP11.54□□□□□ -0.56
LDLR-203ENST00000535915 CRIP3Q6Q6R5 217 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 TMEM17Q86X19 198 aa11.54□□□□□ -0.56
LDLR-203ENST00000535915 MAML2Q8IZL2 1156 aaPredicted RBP11.54□□□□□ -0.56
LDLR-203ENST00000535915 STPG2Q8N412 459 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms