RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 PLGP00747 810 aaPredicted RBP8.05□□□□□ -1.12
SF3B2-216ENST00000534765 CELA2AP08217 269 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 HAGHQ16775 308 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 ZNF664Q8N3J9 261 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 ZNF676Q8N7Q3 588 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 OR4C5Q8NGB2 326 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 ZNRF4Q8WWF5 429 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 NUDT9Q9BW91 350 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 VN1R1Q9GZP7 353 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 PCED1AQ9H1Q7 454 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 OR10A5Q9H207 317 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 PRTFDC1Q9NRG1 225 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 PNO1Q9NRX1 252 aaKnown RBP8.05□□□□□ -1.12
SF3B2-216ENST00000534765 LPAR3Q9UBY5 353 aa8.05□□□□□ -1.12
SF3B2-216ENST00000534765 TMEM272A0A1B0GTI8 110 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 SRPX2O60687 465 aaPredicted RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 CTNSO60931 367 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 PTBP3O95758 552 aaKnown RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 IGHV2-5P01817 119 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 CSF1P09603 554 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 PGA4P0DJD7 388 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 PGA5P0DJD9 388 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 PI3P19957 117 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 GALNSP34059 522 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 DVL1P1P54792 670 aaPredicted RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 DHODHQ02127 395 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 ISXQ2M1V0 245 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 WDFY1Q8IWB7 410 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 BCORP1Q8N888 145 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 C8orf44Q96CB5 159 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 PHYHIPLQ96FC7 376 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 OR6C1Q96RD1 312 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 BARX1Q9HBU1 254 aaPredicted RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 DNAJB12Q9NXW2 375 aaKnown RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 C9JQL5 133 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 ALOX12BO75342 701 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 PMS2P2O95744 297 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 IGKV3-11P04433 115 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 CDC34P49427 236 aaPredicted RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 FUT7Q11130 342 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 DHRS2Q13268 280 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 PGGHGQ32M88 737 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 PNLDC1Q8NA58 520 aaKnown RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 DMBX1Q8NFW5 382 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 GRHL3Q8TE85 626 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 FAM122AQ96E09 287 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 URM1Q9BTM9 101 aaKnown RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 PARD6AQ9NPB6 346 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 ZMIZ1Q9ULJ6 1067 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 R4GN57 208 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 SDK2Q58EX2 2172 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 ZFHX2Q9C0A1 2572 aaPredicted RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 C17orf105B2RV13 164 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 SLC33A1O00400 549 aaPredicted RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 ITGA5P08648 1049 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 TRGC1P0CF51 173 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 PSMB6P28072 239 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 THBS2P35442 1172 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 TAS2R43P59537 309 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 PEAR1Q5VY43 1037 aaPredicted RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 SLC39A7Q92504 469 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 THRSPQ92748 146 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 ADIPOR1Q96A54 375 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 HAVCR1Q96D42 359 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 GPR87Q9BY21 358 aa8.04□□□□□ -1.12
SF3B2-216ENST00000534765 ZNF346Q9UL40 294 aaKnown RBP8.04□□□□□ -1.12
SF3B2-216ENST00000534765 ANKRD20A5PA0PJZ0 165 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 ZNF736B4DX44 427 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-216ENST00000534765 PPIHO43447 177 aaKnown RBP8.03□□□□□ -1.12
SF3B2-216ENST00000534765 SSPNQ14714 243 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 HERPUD1Q15011 391 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 TRIM61Q5EBN2 209 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 COX18Q8N8Q8 333 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 SDR9C7Q8NEX9 313 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 FAM174AQ8TBP5 190 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 MOAP1Q96BY2 351 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 PIK3IP1Q96FE7 263 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 PRRC1Q96M27 445 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 NOL4LQ96MY1 436 aaPredicted RBP8.03□□□□□ -1.12
SF3B2-216ENST00000534765 DIRC2Q96SL1 478 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 ZPBPQ9BS86 351 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 LMF2Q9BU23 707 aaKnown RBP8.03□□□□□ -1.12
SF3B2-216ENST00000534765 UBQLN4Q9NRR5 601 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 GPR173Q9NS66 373 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 HOXA6P31267 233 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 UCP3P55916 312 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 HMGN3Q15651 99 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 ZNF584Q8IVC4 421 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 GALNT16Q8N428 558 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 OR6X1Q8NH79 312 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 RNASE8Q8TDE3 154 aaKnown RBP8.03□□□□□ -1.12
SF3B2-216ENST00000534765 ASB17Q8WXJ9 295 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 TMEM37Q8WXS4 190 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 ROBO4Q8WZ75 1007 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 DYRK2Q92630 601 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 MCHR1Q99705 422 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 SIDT1Q9NXL6 827 aaKnown RBP8.03□□□□□ -1.12
SF3B2-216ENST00000534765 LAMTOR5O43504 91 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 C1QL1O75973 258 aa8.03□□□□□ -1.12
SF3B2-216ENST00000534765 FOLR2P14207 255 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms