RNA–Protein interactions for RNA: ENST00000533415.5

CDC27-210, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 2,570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-210ENST00000533415 PLCXD3Q63HM9 321 aa11.62□□□□□ -0.55
CDC27-210ENST00000533415 CCBE1Q6UXH8 406 aaPredicted RBP11.62□□□□□ -0.55
CDC27-210ENST00000533415 PGAP1Q75T13 922 aa11.62□□□□□ -0.55
CDC27-210ENST00000533415 MRPL21Q7Z2W9 205 aaKnown RBP11.62□□□□□ -0.55
CDC27-210ENST00000533415 OR6M1Q8NGM8 313 aa11.62□□□□□ -0.55
CDC27-210ENST00000533415 TNFAIP8L1Q8WVP5 186 aa11.62□□□□□ -0.55
CDC27-210ENST00000533415 YIPF5Q969M3 257 aa11.62□□□□□ -0.55
CDC27-210ENST00000533415 TRIM63Q969Q1 353 aa11.62□□□□□ -0.55
CDC27-210ENST00000533415 S100A16Q96FQ6 103 aaKnown RBP11.62□□□□□ -0.55
CDC27-210ENST00000533415 CCDC32Q9BV29 185 aa11.62□□□□□ -0.55
CDC27-210ENST00000533415 CHST5Q9GZS9 411 aa11.62□□□□□ -0.55
CDC27-210ENST00000533415 GP6Q9HCN6 339 aa11.62□□□□□ -0.55
CDC27-210ENST00000533415 PALMDQ9NP74 551 aa11.62□□□□□ -0.55
CDC27-210ENST00000533415 GGT3PA6NGU5 568 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 CRTAPO75718 401 aaPredicted RBP11.61□□□□□ -0.55
CDC27-210ENST00000533415 MT-ND4P03905 459 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 CECR9P0C854 216 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 COX5AP20674 150 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 VEGFCP49767 419 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 MTCP1P56278 107 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 TGFBR3Q03167 851 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 GDPD1Q8N9F7 314 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 CHST4Q8NCG5 386 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 HAVCR1Q96D42 359 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 SORCS2Q96PQ0 1159 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 HS3ST6Q96QI5 342 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 METTL17Q9H7H0 456 aaPredicted RBP11.61□□□□□ -0.55
CDC27-210ENST00000533415 NEK6Q9HC98 313 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 NPAP1Q9NZP6 1156 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 TMEM235A6NFC5 223 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 NRASP01111 189 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 CALCRP30988 508 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 MPV17P39210 176 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 INPP1P49441 399 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 CDSNQ15517 529 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 NRN1LQ496H8 165 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 VHLLQ6RSH7 139 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 COLCA1Q6ZS62 124 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 CALHM1Q8IU99 346 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 C19orf18Q8NEA5 215 aa11.61□□□□□ -0.55
CDC27-210ENST00000533415 C1orf147Q96MC9 270 aaPredicted RBP11.61□□□□□ -0.55
CDC27-210ENST00000533415 SPTAN1Q13813 2472 aaKnown RBP11.6□□□□□ -0.55
CDC27-210ENST00000533415 SOCS1O15524 211 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 GNB3P16520 340 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 HOXC12P31275 282 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 GPM6AP51674 278 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 C1orf100Q5SVJ3 147 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 PCSK4Q6UW60 755 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 RELL2Q8NC24 303 aaPredicted RBP11.6□□□□□ -0.55
CDC27-210ENST00000533415 ZNF488Q96MN9 340 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 LOC390937A0A1W2PQ73 354 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 M0R1B8 84 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 MTRF1O75570 445 aaKnown RBP11.6□□□□□ -0.55
CDC27-210ENST00000533415 APOC1P02654 83 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 TMEM225BP0DP42 221 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 CA6P23280 308 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 THBS4P35443 961 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 KIR2DL3P43628 341 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 MAP2K3P46734 347 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 QRFPP83859 136 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 RIN1Q13671 783 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 OR8S1Q8NH09 359 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 WBP1Q96G27 269 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 COX4I2Q96KJ9 171 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 NLKQ9UBE8 527 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 POU2F3Q9UKI9 436 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 OSGIN2Q9Y236 505 aa11.6□□□□□ -0.55
CDC27-210ENST00000533415 IGHV1-18A0A0C4DH31 117 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 IGKV1-12A0A0C4DH73 117 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 F8VVB4 439 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 F8VWA3 439 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 ORC5O43913 435 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 SMPD2O60906 423 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 IGKV1D-12P01611 117 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 ZNF12P17014 697 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 CEACAM8P31997 349 aaPredicted RBP11.59□□□□□ -0.55
CDC27-210ENST00000533415 CCKARP32238 428 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 PLA2G5P39877 138 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 CCR6P51684 374 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 SCN1BQ07699 218 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 PYHIN1Q6K0P9 492 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 SLC25A40Q8TBP6 338 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 NANOS1Q8WY41 292 aaKnown RBP11.59□□□□□ -0.55
CDC27-210ENST00000533415 DYRK2Q92630 601 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 GTF3AQ92664 365 aaKnown RBP11.59□□□□□ -0.55
CDC27-210ENST00000533415 APOBEC3DQ96AK3 386 aaPredicted RBP11.59□□□□□ -0.55
CDC27-210ENST00000533415 REPIN1Q9BWE0 567 aaKnown RBP11.59□□□□□ -0.55
CDC27-210ENST00000533415 BEX2Q9BXY8 128 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 ABCG5Q9H222 651 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 TP63Q9H3D4 680 aaPredicted RBP11.59□□□□□ -0.55
CDC27-210ENST00000533415 BEX1Q9HBH7 125 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 CDH20Q9HBT6 801 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 IL36RNQ9UBH0 155 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 H0YL77 283 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 LDLRAD4O15165 306 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 GDNFP39905 211 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 PTGFRP43088 359 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 FABP6P51161 128 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 PRDX4Q13162 271 aa11.59□□□□□ -0.55
CDC27-210ENST00000533415 GPR176Q14439 515 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms