RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 DHRS7CA6NNS2 312 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 H3BSH0 61 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 SLC1A7O00341 560 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 SYT7O43581 403 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 LMX1BO60663 402 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 CYB5R3P00387 301 aaPredicted RBP10.09□□□□□ -0.79
SSBP3-214ENST00000533209 IGHV2-70P01814 119 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 GRPP07492 148 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 UBCP0CG48 685 aaKnown RBP10.09□□□□□ -0.79
SSBP3-214ENST00000533209 MYL12AP19105 171 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 TGM4P49221 684 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 GBX2P52951 348 aaPredicted RBP10.09□□□□□ -0.79
SSBP3-214ENST00000533209 CSNK2BP67870 215 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 MZT1Q08AG7 82 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 MRPL28Q13084 256 aaKnown RBP10.09□□□□□ -0.79
SSBP3-214ENST00000533209 TMEM244Q5VVB8 128 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 TMEM42Q69YG0 159 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 XAF1Q6GPH4 301 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 TMPRSS11AQ6ZMR5 421 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 AHSA2Q719I0 299 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 ZDHHC23Q8IYP9 409 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 STX19Q8N4C7 294 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 KLHL36Q8N4N3 616 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 ZNF485Q8NCK3 441 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 CCDC54Q8NEL0 328 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 OR1M1Q8NGA1 313 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 OR52N1Q8NH53 320 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 CLDND2Q8NHS1 167 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 MICU1Q9BPX6 476 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 NARFLQ9H6Q4 476 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 FN3KRPQ9HA64 309 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 CR1P17927 2039 aa10.09□□□□□ -0.79
SSBP3-214ENST00000533209 A6NIN4 97 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 ANXA2P2A6NMY6 339 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 NRASP01111 189 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 ISG15P05161 165 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 IGHV4-31P0DP07 118 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 C21orf33P30042 268 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-214ENST00000533209 THBS2P35442 1172 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 GTF2A1P52655 376 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-214ENST00000533209 LMO4P61968 165 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 BTG1P62324 171 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 ZNF154Q13106 437 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 MED21Q13503 144 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 ZMYND11Q15326 602 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 CEACAM21Q3KPI0 293 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 FAM76BQ5HYJ3 339 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 DMRTC1Q5HYR2 192 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 CEP78Q5JTW2 689 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 FAM201AQ5SY85 155 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 CLVS2Q5SYC1 327 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 CLEC9AQ6UXN8 241 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 ZNF826PQ6ZT77 177 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 PEG10Q86TG7 708 aaKnown RBP10.08□□□□□ -0.8
SSBP3-214ENST00000533209 C11orf53Q8IXP5 236 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 OR11L1Q8NGX0 322 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 OR10AC1Q8NH08 325 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 RPS4Y2Q8TD47 263 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 HAVCR2Q8TDQ0 301 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 SGCDQ92629 289 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 HPS1Q92902 700 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 RNF170Q96K19 258 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 CNBD2Q96M20 576 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 ZNF184Q99676 751 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-214ENST00000533209 RTL8AQ9BWD3 113 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 TLNRD1Q9H1K6 362 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 PAK1IP1Q9NWT1 392 aaPredicted RBP10.08□□□□□ -0.8
SSBP3-214ENST00000533209 C1orf123Q9NWV4 160 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 SCN3BQ9NY72 215 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 PCDHGB5Q9Y5G0 923 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 TANC2Q9HCD6 1990 aa10.08□□□□□ -0.8
SSBP3-214ENST00000533209 ABCA1O95477 2261 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 A6NLC8 198 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 TMEM210A6NLX4 147 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 LRRC30A6NM36 301 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 PTGES3LE9PB15 166 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 ZFPL1O95159 310 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 LALBAP00709 142 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 CDK1P06493 297 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 CCDC159P0C7I6 412 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 CDH15P55291 814 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 SLC35A2P78381 396 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 HOXA4Q00056 320 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-214ENST00000533209 CCDC58Q4VC31 144 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 PLCXD3Q63HM9 321 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 MOB3CQ70IA8 216 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 LRRC28Q86X40 367 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-214ENST00000533209 C1orf87Q8N0U7 546 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 ZNF676Q8N7Q3 588 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 OR5A2Q8NGI9 324 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 GATAD2BQ8WXI9 593 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 ADAT3Q96EY9 351 aaPredicted RBP10.07□□□□□ -0.8
SSBP3-214ENST00000533209 C1orf159Q96HA4 380 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 HIST1H2AAQ96QV6 131 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 PDCD1LG2Q9BQ51 273 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 DUSP21Q9H596 190 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 GPR173Q9NS66 373 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 CHCHD3Q9NX63 227 aaKnown RBP10.07□□□□□ -0.8
SSBP3-214ENST00000533209 BABAM2Q9NXR7 383 aa10.07□□□□□ -0.8
SSBP3-214ENST00000533209 RNF7Q9UBF6 113 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms