RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 NUDCD2Q8WVJ2 157 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 SLC35B4Q969S0 331 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 PLEKHA2Q9HB19 425 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 MED9Q9NWA0 146 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 FUT3P21217 361 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 FAAP20Q6NZ36 180 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 PCYT1BQ9Y5K3 369 aaPredicted RBP13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 SDCBPO00560 298 aaPredicted RBP13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 SPINK2P20155 84 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 SLC25A1P53007 311 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 WNT3P56703 355 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 BATFQ16520 125 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 TMPRSS11FQ6ZWK6 438 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 MOB3BQ86TA1 216 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 PCNPQ8WW12 178 aaKnown RBP13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 C20orf141Q9NUB4 165 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 MTCH1Q9NZJ7 389 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 FOXJ3Q9UPW0 622 aa13.24□□□□□ -0.29
PCDHA9-202ENST00000532602 CROCCQ5TZA2 2017 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 A0A1W2PQF6 199 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 MEX3AA1L020 520 aaKnown RBP13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 GP2P55259 537 aaKnown RBP13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 SOX8P57073 446 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 BAGE3Q86Y29 109 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 BAGE2Q86Y30 109 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 FYTTD1Q96QD9 318 aaKnown RBP13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 TMEM104Q8NE00 496 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 RAB1BQ9H0U4 201 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 PDCD1Q15116 288 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 OR10K2Q6IF99 312 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 ACTR3CQ9C0K3 210 aaPredicted RBP13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 TSTD3H0UI37 97 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 OR2F2O95006 317 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 TMIGD3P0DMS9 266 aaPredicted RBP13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 OR2F1Q13607 317 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 TRAT1Q6PIZ9 186 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 M1APQ8TC57 530 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 WDR34Q96EX3 536 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 CHST6Q9GZX3 395 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 A0A1B0GTQ1 180 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 ZNF354AO60765 605 aaPredicted RBP13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 RAB1CQ92928 201 aa13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 BARX1Q9HBU1 254 aaPredicted RBP13.23□□□□□ -0.29
PCDHA9-202ENST00000532602 E5RGE8 158 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 GPX5O75715 221 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 SRP14P37108 136 aaKnown RBP13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 WDR74Q6RFH5 385 aaPredicted RBP13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 LYSMD2Q8IV50 215 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 NUBPLQ8TB37 319 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 POM121L2Q96KW2 1035 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 DDOQ99489 341 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 NSG2Q9Y328 171 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 PPIHO43447 177 aaKnown RBP13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 LYZL6O75951 148 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 TRAPPC2P0DI81 140 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 TRAPPC2BP0DI82 140 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 FABP5Q01469 135 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 NPEPL1Q8NDH3 523 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 OR10D3Q8NH80 312 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 C12orf10Q9HB07 376 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 RGPD3A6NKT7 1758 aaPredicted RBP13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 COX5AP20674 150 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 ASAH1Q13510 395 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 DEGS2Q6QHC5 323 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 OR2T6Q8NHC8 308 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 HMGCLL1Q8TB92 370 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 RTN4IP1Q8WWV3 396 aaPredicted RBP13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 OSGIN2Q9Y236 505 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 HRKO00198 91 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 FBP1P09467 338 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 NEU3Q9UQ49 428 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 DGCR2P98153 550 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 OR10AD1Q8NGE0 317 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 MOB3AQ96BX8 217 aa13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 DNAJB12Q9NXW2 375 aaKnown RBP13.22□□□□□ -0.29
PCDHA9-202ENST00000532602 RBBP6Q7Z6E9 1792 aaKnown RBP13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 FXYD1O00168 92 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 CD3EP07766 207 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 PXDC1Q5TGL8 231 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 OR4Q3Q8NH05 313 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 EXTL1Q92935 676 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 RPEQ96AT9 228 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 ONECUT1Q9UBC0 465 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 LALBAP00709 142 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 ZBTB25P24278 435 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 KLF3P57682 345 aaPredicted RBP13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 PLPPR2Q96GM1 343 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 AKR1E2Q96JD6 320 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 NUPL2O15504 423 aaKnown RBP13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 GALNSP34059 522 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 KIAA0040Q15053 153 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 KCNRGQ8N5I3 272 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 ADPRHL1Q8NDY3 354 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 SCARB1Q8WTV0 552 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 TMEM56Q96MV1 263 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 AK3Q9UIJ7 227 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 TCFL5Q9UL49 500 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 LRP12Q9Y561 859 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 CSAG2Q9Y5P2 127 aa13.21□□□□□ -0.29
PCDHA9-202ENST00000532602 NUDT19A8MXV4 375 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms