RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 H2AFB1P0C5Y9 115 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 H2AFB2P0C5Z0 115 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 CECR9P0C854 216 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 ARSBP15848 533 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 ADRA2CP18825 462 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 PTAFRP25105 342 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 TNFSF8P32971 234 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 ZNF93P35789 620 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-228ENST00000531007 NR4A2P43354 598 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 EVX1P49640 407 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 FUT6P51993 359 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 CAV3P56539 151 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 PPP1CBP62140 327 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 PITPNAQ00169 270 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 DCTN2Q13561 401 aaKnown RBP8.5□□□□□ -1.05
CTNND1-228ENST00000531007 TAB1Q15750 504 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 ASPHD2Q6ICH7 369 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 TMEM108Q6UXF1 575 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 LHFPL2Q6ZUX7 228 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 LYPD6Q86Y78 171 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 ZNF808Q8N4W9 903 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-228ENST00000531007 OR13C9Q8NGT0 318 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 SSC4DQ8WTU2 575 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 RNASE6Q93091 150 aaKnown RBP8.5□□□□□ -1.05
CTNND1-228ENST00000531007 GFI1Q99684 422 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 CCDC32Q9BV29 185 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 MRPL18Q9H0U6 180 aaKnown RBP8.5□□□□□ -1.05
CTNND1-228ENST00000531007 ABCG5Q9H222 651 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 LIN7BQ9HAP6 207 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 PCDHB16Q9NRJ7 776 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 CYSLTR2Q9NS75 346 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 MRPL15Q9P015 296 aaKnown RBP8.5□□□□□ -1.05
CTNND1-228ENST00000531007 NDRG3Q9UGV2 375 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 ERRFI1Q9UJM3 462 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-228ENST00000531007 KALRNO60229 2985 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 FASNP49327 2511 aaKnown RBP8.5□□□□□ -1.05
CTNND1-228ENST00000531007 ZNF462Q96JM2 2506 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 COL6A6A6NMZ7 2263 aa8.5□□□□□ -1.05
CTNND1-228ENST00000531007 IGHV2OR16-5A0A0B4J2B6 119 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 IGHV1-18A0A0C4DH31 117 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 FABP12A6NFH5 140 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 ANKRD30BLA7E2S9 258 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 VSTM5A8MXK1 200 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 ZNF780AO75290 641 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-228ENST00000531007 HCKP08631 526 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 FAHP16930 419 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 RAB6AP20340 208 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 AZGP1P25311 298 aaKnown RBP8.49□□□□□ -1.05
CTNND1-228ENST00000531007 WNT5AP41221 380 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 ART1P52961 327 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 ATP1B3P54709 279 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 NAAAQ02083 359 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 SPOCK1Q08629 439 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 MZT1Q08AG7 82 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 FAM27E3Q08E93 113 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 GPR176Q14439 515 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 TSC22D1Q15714 1073 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 ZNF718Q3SXZ3 478 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 MBNL2Q5VZF2 373 aaKnown RBP8.49□□□□□ -1.05
CTNND1-228ENST00000531007 OR2W3Q7Z3T1 314 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 LIX1LQ8IVB5 337 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 ZNF101Q8IZC7 436 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 MFSD4AQ8N468 514 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 JAGN1Q8N5M9 183 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 SAMD12Q8N8I0 201 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 GDPD1Q8N9F7 314 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 OR2AE1Q8NHA4 323 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 FAM3DQ96BQ1 224 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 S100A16Q96FQ6 103 aaKnown RBP8.49□□□□□ -1.05
CTNND1-228ENST00000531007 DIRAS2Q96HU8 199 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 RADILQ96JH8 1075 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 HIST1H2AAQ96QV6 131 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 NUDT16L1Q9BRJ7 211 aaKnown RBP8.49□□□□□ -1.05
CTNND1-228ENST00000531007 KCNJ16Q9NPI9 418 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 PTTG3PQ9NZH4 202 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 CGGBP1Q9UFW8 167 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-228ENST00000531007 STARD10Q9Y365 291 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 SHANK1Q9Y566 2161 aa8.49□□□□□ -1.05
CTNND1-228ENST00000531007 SMIM30A4D0T7 59 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 OR5B21A6NL26 309 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 CD300LBA8K4G0 201 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 FAM25AB3EWG3 89 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 FAM25CB3EWG5 89 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 FAM25GB3EWG6 89 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 H3BSH0 61 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 AGFG2O95081 481 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 NGFP01138 241 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 CELA3BP08861 270 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 CCL2P13500 99 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 KITLGP21583 273 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 ACKR3P25106 362 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 GLRXP35754 106 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 MNDAP41218 407 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 RBP2P50120 134 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 SELENOVP59797 346 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 MRPS10P82664 201 aaKnown RBP8.48□□□□□ -1.05
CTNND1-228ENST00000531007 KISS1Q15726 138 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 UBE2V2Q15819 145 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 CEACAM21Q3KPI0 293 aa8.48□□□□□ -1.05
CTNND1-228ENST00000531007 HES5Q5TA89 166 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms