RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 VRK1Q99986 396 aaPredicted RBP6.78□□□□□ -1.32
SSBP3-211ENST00000528787 PDCD1LG2Q9BQ51 273 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 RHNO1Q9BSD3 238 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 MRI1Q9BV20 369 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 FAM192AQ9GZU8 254 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 TPK1Q9H3S4 243 aa6.78□□□□□ -1.32
SSBP3-211ENST00000528787 TRBV5-5A0A0J9YX44 114 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 LRP5LA4QPB2 252 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 TRIM64BA6NI03 449 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 PRR32B1ATL7 298 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 MAGEB4O15481 346 aaPredicted RBP6.77□□□□□ -1.33
SSBP3-211ENST00000528787 GPX5O75715 221 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 INMTO95050 263 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 FSTL3O95633 263 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 F12P00748 615 aaPredicted RBP6.77□□□□□ -1.33
SSBP3-211ENST00000528787 PLAUP00749 431 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 HCKP08631 526 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 ADRA2AP08913 450 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 UBBP0CG47 229 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 CA6P23280 308 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 TGFBR2P37173 567 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 MPV17P39210 176 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 KIR3DL2P43630 455 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 GATA4P43694 442 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 MAP2K4P45985 399 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 GTF2A1P52655 376 aaPredicted RBP6.77□□□□□ -1.33
SSBP3-211ENST00000528787 NANOS3P60323 173 aaKnown RBP6.77□□□□□ -1.33
SSBP3-211ENST00000528787 DBPQ10586 325 aaPredicted RBP6.77□□□□□ -1.33
SSBP3-211ENST00000528787 PRDX4Q13162 271 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 ODF4Q2M2E3 257 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 ZNF181Q2M3W8 571 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 ACSM3Q53FZ2 586 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 GLT8D1Q68CQ7 371 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 TMEM42Q69YG0 159 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 C11orf71Q6IPW1 123 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 PRSS57Q6UWY2 283 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 CEACAM19Q7Z692 300 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 ZSCAN4Q8NAM6 433 aaPredicted RBP6.77□□□□□ -1.33
SSBP3-211ENST00000528787 BHLHE23Q8NDY6 225 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 OR10Z1Q8NGY1 313 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 LILRB1Q8NHL6 650 aaPredicted RBP6.77□□□□□ -1.33
SSBP3-211ENST00000528787 RDH5Q92781 318 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 FGGYQ96C11 551 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 RNF170Q96K19 258 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 PGLYRP3Q96LB9 341 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 KCTD7Q96MP8 289 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 OPALINQ96PE5 141 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 UQCC2Q9BRT2 126 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 TMED9Q9BVK6 235 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 CACNG6Q9BXT2 260 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 GSX2Q9BZM3 304 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 SNTG1Q9NSN8 517 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 RASL12Q9NYN1 266 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 GHRLQ9UBU3 117 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 GLS2Q9UI32 602 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 PTPN13Q12923 2485 aa6.77□□□□□ -1.33
SSBP3-211ENST00000528787 ARFGEF3Q5TH69 2177 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 ROS1P08922 2347 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 TRAV1-2A0A0B4J238 106 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 IGHV1-69-2A0A0G2JMI3 117 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 A0A1B0GTI1 187 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 ZNF850A8MQ14 1090 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 E9PI62 339 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 OVOL3O00110 214 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 SPRY3O43610 288 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 NDUFA2O43678 99 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 IGHV1-46P01743 117 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 UCHL1P09936 223 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 CD36P16671 472 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 FAHP16930 419 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 ATF1P18846 271 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 BDKRB2P30411 391 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 PDLIM4P50479 330 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 ATP5J2P56134 94 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 TMEM33P57088 247 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 ERVS71-1P61550 626 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 RIN1Q13671 783 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 SHEQ5VZ18 495 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 XAF1Q6GPH4 301 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 CD200R1LQ6Q8B3 271 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 CLEC2AQ6UVW9 174 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 MOB3CQ70IA8 216 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 SAXO1Q8IYX7 474 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 OR5AS1Q8N127 324 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 MUC20Q8N307 709 aaPredicted RBP6.76□□□□□ -1.33
SSBP3-211ENST00000528787 OR1M1Q8NGA1 313 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 ZNF420Q8TAQ5 688 aaPredicted RBP6.76□□□□□ -1.33
SSBP3-211ENST00000528787 UBASH3BQ8TF42 649 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 RAB2BQ8WUD1 216 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 OR5P3Q8WZ94 311 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 RAB1CQ92928 201 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 POM121Q96HA1 1249 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 LYZL4Q96KX0 146 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 SORCS2Q96PQ0 1159 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 DERL3Q96Q80 235 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 GPER1Q99527 375 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 PKIBQ9C010 78 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 CHODLQ9H9P2 273 aa6.76□□□□□ -1.33
SSBP3-211ENST00000528787 EXOSC4Q9NPD3 245 aaKnown RBP6.76□□□□□ -1.33
SSBP3-211ENST00000528787 ZNF701Q9NV72 531 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms