RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 ADORA2BP29275 332 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 S100A7P31151 101 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 SDC4P31431 198 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 FMO3P31513 532 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 OPRD1P41143 372 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 LEPP41159 167 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 PRLHRP49683 370 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 RAB7AP51149 207 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 RAB10P61026 200 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 RPL32P62910 135 aaKnown RBP2.59□□□□□ -1.99
CD44-229ENST00000528672 DYNLL1P63167 89 aaKnown RBP2.59□□□□□ -1.99
CD44-229ENST00000528672 MS4A2Q01362 244 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 HMGCS1Q01581 520 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 SLC10A7Q0GE19 358 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 C2orf80Q0P641 193 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 CDK10Q15131 360 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 ZNF77Q15935 545 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 DGUOKQ16854 277 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 MRGPRG-AS1Q2M3A8 158 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 LY6G6FQ5SQ64 297 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 TPRG1LQ5T0D9 272 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 UBE2UQ5VVX9 321 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 RWDD4Q6NW29 188 aaKnown RBP2.59□□□□□ -1.99
CD44-229ENST00000528672 SCIMPQ6UWF3 145 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 ZNF621Q6ZSS3 439 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 UNC93AQ86WB7 457 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 APRG1Q8IVJ8 170 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 C9orf40Q8IXQ3 194 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 SLC34A3Q8N130 599 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 OR6V1Q8N148 313 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 ABHD12Q8N2K0 398 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 CSNK1G2-AS1Q8NCQ2 148 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 OR1M1Q8NGA1 313 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 OR4F15Q8NGB8 312 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 OR4F6Q8NGB9 312 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 OR10G3Q8NGC4 313 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 OR5AK3PQ8NH89 298 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 COQ8AQ8NI60 647 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 GPR151Q8TDV0 419 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 SFT2D1Q8WV19 159 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 ASB17Q8WXJ9 295 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 CPNE2Q96FN4 548 aaPredicted RBP2.59□□□□□ -1.99
CD44-229ENST00000528672 LINC00479Q96M42 142 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 BIRC8Q96P09 236 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 MBOAT4Q96T53 435 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 VAT1Q99536 393 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 TRIM51Q9BSJ1 452 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 MRPS26Q9BYN8 205 aaKnown RBP2.59□□□□□ -1.99
CD44-229ENST00000528672 CHRNA10Q9GZZ6 450 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 MFSD1Q9H3U5 465 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 RBKSQ9H477 322 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 ARMC7Q9H6L4 198 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 UBE2ZQ9H832 354 aaPredicted RBP2.59□□□□□ -1.99
CD44-229ENST00000528672 HMG20AQ9NP66 347 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 INPP5EQ9NRR6 644 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 FGFR1OP2Q9NVK5 253 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 DDIT4Q9NX09 232 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 B3GNT2Q9NY97 397 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 OR12D3Q9UGF7 316 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 VPREB3Q9UKI3 123 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 PYCARDQ9ULZ3 195 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 FARSAQ9Y285 508 aaKnown RBP2.59□□□□□ -1.99
CD44-229ENST00000528672 MTCH2Q9Y6C9 303 aa2.59□□□□□ -1.99
CD44-229ENST00000528672 USP42Q9H9J4 1324 aaKnown RBP2.59□□□□□ -2
CD44-229ENST00000528672 POGZQ7Z3K3 1410 aa2.59□□□□□ -2
CD44-229ENST00000528672 IFT140Q96RY7 1462 aa2.58□□□□□ -2
CD44-229ENST00000528672 WDR97A6NE52 1622 aa2.58□□□□□ -2
CD44-229ENST00000528672 KIR2DL5BA0A0G2JN68 375 aa2.58□□□□□ -2
CD44-229ENST00000528672 KIR2DL5BA0A0G2JPC4 375 aa2.58□□□□□ -2
CD44-229ENST00000528672 A0A1W2PRD5 423 aa2.58□□□□□ -2
CD44-229ENST00000528672 SMIM9A6NGZ8 99 aa2.58□□□□□ -2
CD44-229ENST00000528672 HIDE1A8MVS5 230 aa2.58□□□□□ -2
CD44-229ENST00000528672 FAM220BPB1ANY3 271 aa2.58□□□□□ -2
CD44-229ENST00000528672 ANKRD63C9JTQ0 380 aa2.58□□□□□ -2
CD44-229ENST00000528672 M0R3G1 203 aa2.58□□□□□ -2
CD44-229ENST00000528672 SAP18O00422 153 aaKnown RBP2.58□□□□□ -2
CD44-229ENST00000528672 TNFSF11O14788 317 aa2.58□□□□□ -2
CD44-229ENST00000528672 SLC31A1O15431 190 aa2.58□□□□□ -2
CD44-229ENST00000528672 CYB5BO43169 146 aa2.58□□□□□ -2
CD44-229ENST00000528672 SCO1O75880 301 aa2.58□□□□□ -2
CD44-229ENST00000528672 SLC22A5O76082 557 aa2.58□□□□□ -2
CD44-229ENST00000528672 SUPT7LO94864 414 aa2.58□□□□□ -2
CD44-229ENST00000528672 MPZL1O95297 269 aa2.58□□□□□ -2
CD44-229ENST00000528672 GJB5O95377 273 aa2.58□□□□□ -2
CD44-229ENST00000528672 CNIH1O95406 144 aa2.58□□□□□ -2
CD44-229ENST00000528672 GPR75O95800 540 aa2.58□□□□□ -2
CD44-229ENST00000528672 LALBAP00709 142 aa2.58□□□□□ -2
CD44-229ENST00000528672 TIMP1P01033 207 aa2.58□□□□□ -2
CD44-229ENST00000528672 IFNW1P05000 195 aa2.58□□□□□ -2
CD44-229ENST00000528672 ISG15P05161 165 aa2.58□□□□□ -2
CD44-229ENST00000528672 CST2P09228 141 aa2.58□□□□□ -2
CD44-229ENST00000528672 LAMP1P11279 417 aa2.58□□□□□ -2
CD44-229ENST00000528672 FOLR1P15328 257 aa2.58□□□□□ -2
CD44-229ENST00000528672 BCKDHBP21953 392 aa2.58□□□□□ -2
CD44-229ENST00000528672 CXCR1P25024 350 aa2.58□□□□□ -2
CD44-229ENST00000528672 IVDP26440 423 aa2.58□□□□□ -2
CD44-229ENST00000528672 GDF1P27539 372 aa2.58□□□□□ -2
CD44-229ENST00000528672 S100A11P31949 105 aa2.58□□□□□ -2
CD44-229ENST00000528672 IFNGR2P38484 337 aa2.58□□□□□ -2
CD44-229ENST00000528672 CD200P41217 278 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms