RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 DOK3Q7L591 496 aa8□□□□□ -1.13
CHD7-208ENST00000528280 THAP5Q7Z6K1 395 aa8□□□□□ -1.13
CHD7-208ENST00000528280 TCEANCQ8N8B7 351 aa8□□□□□ -1.13
CHD7-208ENST00000528280 BBS1Q8NFJ9 593 aa8□□□□□ -1.13
CHD7-208ENST00000528280 OR5A2Q8NGI9 324 aa8□□□□□ -1.13
CHD7-208ENST00000528280 TRUB1Q8WWH5 349 aaKnown RBP8□□□□□ -1.13
CHD7-208ENST00000528280 OR5P3Q8WZ94 311 aa8□□□□□ -1.13
CHD7-208ENST00000528280 PIGCQ92535 297 aa8□□□□□ -1.13
CHD7-208ENST00000528280 RFKQ969G6 155 aa8□□□□□ -1.13
CHD7-208ENST00000528280 MED30Q96HR3 178 aa8□□□□□ -1.13
CHD7-208ENST00000528280 TECTBQ96PL2 329 aa8□□□□□ -1.13
CHD7-208ENST00000528280 OR8B4Q96RC9 309 aa8□□□□□ -1.13
CHD7-208ENST00000528280 MYCBPQ99417 103 aaPredicted RBP8□□□□□ -1.13
CHD7-208ENST00000528280 SLC6A7Q99884 636 aa8□□□□□ -1.13
CHD7-208ENST00000528280 RBM4BQ9BQ04 359 aaKnown RBP8□□□□□ -1.13
CHD7-208ENST00000528280 TLNRD1Q9H1K6 362 aa8□□□□□ -1.13
CHD7-208ENST00000528280 MOB1AQ9H8S9 216 aa8□□□□□ -1.13
CHD7-208ENST00000528280 ZNF319Q9P2F9 582 aa8□□□□□ -1.13
CHD7-208ENST00000528280 WARS2Q9UGM6 360 aaKnown RBP8□□□□□ -1.13
CHD7-208ENST00000528280 ORC6Q9Y5N6 252 aa8□□□□□ -1.13
CHD7-208ENST00000528280 TENM1Q9UKZ4 2725 aa8□□□□□ -1.13
CHD7-208ENST00000528280 DOCK11Q5JSL3 2073 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 ZNF816-ZNF321PA0A0X1KG74 233 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 TMEM89A2RUT3 159 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 ZNF850A8MQ14 1090 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 CDIPTO14735 213 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 TMPRSS2O15393 492 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 PRKYO43930 277 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 OR2T7P0C7T2 308 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 ATP6V1E1P36543 226 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 HCCSP53701 268 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 GNG3P63215 75 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 ACTG1P63261 375 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 SRSF2Q01130 221 aaKnown RBP7.99□□□□□ -1.13
CHD7-208ENST00000528280 PRDX4Q13162 271 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 KPNB1Q14974 876 aaKnown RBP7.99□□□□□ -1.13
CHD7-208ENST00000528280 PDCD1Q15116 288 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 RCN1Q15293 331 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 CEACAM21Q3KPI0 293 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 ATPAF1Q5TC12 328 aaPredicted RBP7.99□□□□□ -1.13
CHD7-208ENST00000528280 GPR157Q5UAW9 335 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 AADACL4Q5VUY2 407 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 METTL11BQ5VVY1 283 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 C12orf73Q69YU5 71 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 ZNF826PQ6ZT77 177 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 KCTD8Q6ZWB6 473 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 AMIGO2Q86SJ2 522 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 C11orf53Q8IXP5 236 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 ZDHHC23Q8IYP9 409 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 GCSAMQ8N6F7 178 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 CCDC54Q8NEL0 328 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 OR8B12Q8NGG6 310 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 OR8J1Q8NGP2 316 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 OR2T27Q8NH04 317 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 LRRC29Q8WV35 223 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 LRTOMTQ8WZ04 291 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 SLC25A28Q96A46 364 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 DACT3Q96B18 629 aaPredicted RBP7.99□□□□□ -1.13
CHD7-208ENST00000528280 ITPKCQ96DU7 683 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 PKP2Q99959 881 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 PBOV1Q9GZY1 135 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 CNTD2Q9H8S5 307 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 CLN6Q9NWW5 311 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 RASL12Q9NYN1 266 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 ZNF69Q9UC07 566 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 IKZF2Q9UKS7 526 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 SNX5Q9Y5X3 404 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 MGAM2Q2M2H8 2515 aa7.99□□□□□ -1.13
CHD7-208ENST00000528280 ARHGAP32A7KAX9 2087 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 NOTCH1P46531 2555 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 CCDC182A6NF36 153 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 OR5B21A6NL26 309 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 SNTNA6NMZ2 147 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 DHRS7CA6NNS2 312 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 SRRM5B3KS81 715 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 ZNF879B4DU55 563 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 CLDN34H7C241 214 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 DVL1O14640 695 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 NDUFB3O43676 98 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 TOX4O94842 621 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 PLATP00750 562 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 GYPAP02724 150 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 KRT8P05787 483 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 PRTN3P24158 256 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 HTR1FP30939 366 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 CDC42P60953 191 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 FOXL1Q12952 345 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 BAMBIQ13145 260 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 TUSC1Q2TAM9 212 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 LRRC10Q5BKY1 277 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 KLF17Q5JT82 389 aaPredicted RBP7.98□□□□□ -1.13
CHD7-208ENST00000528280 ZNF322Q6U7Q0 402 aaPredicted RBP7.98□□□□□ -1.13
CHD7-208ENST00000528280 WDR82Q6UXN9 313 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 COMMD2Q86X83 199 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 SLC35F2Q8IXU6 374 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 CMTM4Q8IZR5 234 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 SIGLECL1Q8N7X8 197 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.98□□□□□ -1.13
CHD7-208ENST00000528280 C3orf56Q8N813 242 aa7.98□□□□□ -1.13
CHD7-208ENST00000528280 IL4I1Q96RQ9 567 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms