RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 A0A1W2PP11 408 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 SERPINE3A8MV23 424 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 STMND1H3BQB6 276 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 SYNGR3O43761 229 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 MGMTP16455 207 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 FAHP16930 419 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 SFRP5Q5T4F7 317 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 RIPPLY2Q5TAB7 128 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 RAB11FIP2Q7L804 512 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 CPNE2Q96FN4 548 aaPredicted RBP13.44□□□□□ -0.26
USH1C-207ENST00000527720 PDCD10Q9BUL8 212 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 SMOC1Q9H4F8 434 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 P4HTMQ9NXG6 502 aa13.44□□□□□ -0.26
USH1C-207ENST00000527720 LOC100509620A0A075B734 347 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 LINC01387J3KSC0 135 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 FCGR2AP12318 317 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 ARFRP1Q13795 201 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 AAED1Q7RTV5 226 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 PCSK5Q92824 1860 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 SGK3Q96BR1 496 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 ZNF837Q96EG3 531 aaPredicted RBP13.43□□□□□ -0.26
USH1C-207ENST00000527720 SPRY4Q9C004 299 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 CRLF2Q9HC73 371 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 ZNF391Q9UJN7 358 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 I3L521 148 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 RAD51DO75771 328 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 OR2F2O95006 317 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 DBHP09172 617 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 RFPL3SP0C7P2 107 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 CNR1P21554 472 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 CPT2P23786 658 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 MPLP40238 635 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 TAS2R46P59540 309 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 CAMK2BQ13554 666 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 OR2F1Q13607 317 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 TMEM128Q5BJH2 165 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 C11orf87Q6NUJ2 197 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 RTN4RL2Q86UN3 420 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 TMEM17Q86X19 198 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 TMEM185AQ8NFB2 350 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 SEMA6DQ8NFY4 1073 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 OR5H2Q8NGV7 314 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 OR1F12Q8NHA8 337 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 CPNE4Q96A23 557 aaPredicted RBP13.43□□□□□ -0.26
USH1C-207ENST00000527720 SPSB1Q96BD6 273 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 FN3KRPQ9HA64 309 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 ZNF230Q9UIE0 474 aaPredicted RBP13.43□□□□□ -0.26
USH1C-207ENST00000527720 GPR132Q9UNW8 380 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 WDFY3Q8IZQ1 3526 aa13.43□□□□□ -0.26
USH1C-207ENST00000527720 CCDC187A0A096LP49 1063 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 DBX1A6NMT0 343 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 CXCL13O43927 109 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 KRTAP27-1Q3LI81 207 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 PDSS1Q5T2R2 415 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 C1QL2Q7Z5L3 287 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 SULF2Q8IWU5 870 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 ADAD2Q8NCV1 583 aaKnown RBP13.42□□□□□ -0.26
USH1C-207ENST00000527720 OR10D3Q8NH80 312 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 MARCH1Q8TCQ1 289 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 PCNPQ8WW12 178 aaKnown RBP13.42□□□□□ -0.26
USH1C-207ENST00000527720 ST8SIA4Q92187 359 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 TNFSF18Q9UNG2 199 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 hCG_1807616A0A1W2PRN6 198 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 OR6C6A6NF89 314 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 CRYZL1O95825 349 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 NMBP08949 121 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 LIPCP11150 499 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 AKR1C4P17516 323 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 POU3F2P20265 443 aaPredicted RBP13.42□□□□□ -0.26
USH1C-207ENST00000527720 BLVRBP30043 206 aaPredicted RBP13.42□□□□□ -0.26
USH1C-207ENST00000527720 UBA52P62987 128 aaKnown RBP13.42□□□□□ -0.26
USH1C-207ENST00000527720 LPAL2Q16609 132 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 SNAI3Q3KNW1 292 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 WIPI1Q5MNZ9 446 aaPredicted RBP13.42□□□□□ -0.26
USH1C-207ENST00000527720 NSUN5P2Q63ZY6 315 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 JMJD6Q6NYC1 403 aaPredicted RBP13.42□□□□□ -0.26
USH1C-207ENST00000527720 KCNRGQ8N5I3 272 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 ZBTB44Q8NCP5 570 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 OR5D18Q8NGL1 313 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 PSMF1Q92530 271 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 PECRQ9BY49 303 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 DEPPQ9NTK1 212 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 RDH8Q9NYR8 311 aa13.42□□□□□ -0.26
USH1C-207ENST00000527720 BOKQ9UMX3 212 aaPredicted RBP13.42□□□□□ -0.26
USH1C-207ENST00000527720 RTTNQ86VV8 2226 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 A0A0B4J2A0 478 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 CYTIPO60759 359 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 TRAPPC6AO75865 159 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 JMJD7P0C870 316 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 AMY2BP19961 511 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 SERPINA2P20848 420 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 VAMP1P23763 118 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 FPR2P25090 351 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 GDF1P27539 372 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 NTF4P34130 210 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 GFRA1P56159 465 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 PCBD1P61457 104 aa13.41□□□□□ -0.26
USH1C-207ENST00000527720 ZNF660Q6AZW8 331 aaPredicted RBP13.41□□□□□ -0.26
USH1C-207ENST00000527720 RGS7BPQ6MZT1 257 aaPredicted RBP13.41□□□□□ -0.26
USH1C-207ENST00000527720 PEG10Q86TG7 708 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms