RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 AMELYQ99218 206 aa18.44■□□□□ 0.54
TRAPPC4-208ENST00000527680 FEVQ99581 238 aa18.44■□□□□ 0.54
TRAPPC4-208ENST00000527680 RGCCQ9H4X1 137 aa18.44■□□□□ 0.54
TRAPPC4-208ENST00000527680 SIRT7Q9NRC8 400 aa18.44■□□□□ 0.54
TRAPPC4-208ENST00000527680 SNTG1Q9NSN8 517 aa18.44■□□□□ 0.54
TRAPPC4-208ENST00000527680 HAO2Q9NYQ3 351 aa18.44■□□□□ 0.54
TRAPPC4-208ENST00000527680 MPC1Q9Y5U8 109 aa18.44■□□□□ 0.54
TRAPPC4-208ENST00000527680 BTBD17A6NE02 478 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 ZNF850A8MQ14 1090 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 GNGT2O14610 69 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 TIMM23O14925 209 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 GPR37O15354 613 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 OPRL1P41146 370 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 MS4A2Q01362 244 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 KLHL12Q53G59 568 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 CD300LDQ6UXZ3 194 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 GDPGP1Q6ZNW5 385 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 PIP4P2Q8N4L2 257 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 LY6G5BQ8NDX9 201 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 RPL3LQ92901 407 aaKnown RBP18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 C12orf43Q96C57 262 aaKnown RBP18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 RNF170Q96K19 258 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 HIST1H2AAQ96QV6 131 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 CITED1Q99966 193 aa18.43■□□□□ 0.54
TRAPPC4-208ENST00000527680 A0A1W2PRD5 423 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 A0A1W2PRF3 423 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 A0A1W2PRM7 423 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 PRR23D1E9PI22 279 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 CST1P01037 141 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 LYNP07948 512 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 PRR23D2P0DMB1 279 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 PRB3Q04118 309 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 PRDX4Q13162 271 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 LDLRAD3Q86YD5 345 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 LINC01006Q8NI28 216 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 NPRL2Q8WTW4 380 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 LRTOMTQ8WZ04 291 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 ITPKCQ96DU7 683 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 ZNF391Q9UJN7 358 aa18.42■□□□□ 0.54
TRAPPC4-208ENST00000527680 NKX6-3A6NJ46 265 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 FBP1P09467 338 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 RAP2AP10114 183 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 TGM4P49221 684 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 GUCA2AQ02747 115 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 GINS1Q14691 196 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 PLBD1Q6P4A8 553 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 UBE2FQ969M7 185 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 MED30Q96HR3 178 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 DMRTB1Q96MA1 342 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 DCTN5Q9BTE1 182 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 WDR13Q9H1Z4 485 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 SEMA6AQ9H2E6 1030 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 ABCB9Q9NP78 766 aa18.41■□□□□ 0.54
TRAPPC4-208ENST00000527680 TMEM210A6NLX4 147 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 AKR7A2O43488 359 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 SELENOFO60613 162 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 PAHP00439 452 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 ATPAF1Q5TC12 328 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 ZNF454Q8N9F8 522 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 OR10Z1Q8NGY1 313 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 OTOSQ8NHW6 89 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 OR5P3Q8WZ94 311 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 PKP2Q99959 881 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 CHID1Q9BWS9 393 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 TLNRD1Q9H1K6 362 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 TAS2R1Q9NYW7 299 aa18.4■□□□□ 0.54
TRAPPC4-208ENST00000527680 WNK1Q9H4A3 2382 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 SELLP14151 372 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 NDUFB7P17568 137 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 AMY2BP19961 511 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 ACKR3P25106 362 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 GABRA2P47869 451 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 KRTAP10-3P60369 221 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 RPS7P62081 194 aaKnown RBP18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 GK3PQ14409 553 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 STUMQ69YW2 141 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 DHRS7BQ6IAN0 325 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 FAM81AQ8TBF8 368 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 CCDC124Q96CT7 223 aaKnown RBP18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 RAB3IPQ96QF0 476 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 ZNF556Q9HAH1 456 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 TCF7L1Q9HCS4 588 aa18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 SLC25A10Q9UBX3 287 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC4-208ENST00000527680 A0A1W2PQ09 198 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 NPFFO15130 113 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 CST4P01036 141 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 TFF1P04155 84 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 HMGN1P05114 100 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 DLX1P56177 255 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 TAF9Q16594 264 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 OCLNQ16625 522 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 METAP1DQ6UB28 335 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 KRT77Q7Z794 578 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 CPOQ8IVL8 374 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 ZDHHC23Q8IYP9 409 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 ZSCAN4Q8NAM6 433 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 DNTTIP1Q9H147 329 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 MMP27Q9H306 513 aa18.38■□□□□ 0.53
TRAPPC4-208ENST00000527680 MEIOCA2RUB1 952 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms