RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 LRR1Q96L50 414 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 Q96MT0 163 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 MUS81Q96NY9 551 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 TSPAN32Q96QS1 320 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 OR2M2Q96R28 347 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 NMNAT3Q96T66 252 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 DDOQ99489 341 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 ZNF184Q99676 751 aaPredicted RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 BCL7BQ9BQE9 202 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 ALG12Q9BV10 488 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 RBM24Q9BX46 236 aaKnown RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 MRPL13Q9BYD1 178 aaKnown RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 Q9H521 79 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 RERGLQ9H628 205 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 B3GAT2Q9NPZ5 323 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 RPRD1BQ9NQG5 326 aaKnown RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 CENPMQ9NSP4 180 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 IMPAD1Q9NX62 359 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 HAO2Q9NYQ3 351 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 CRNNQ9UBG3 495 aaPredicted RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 ERRFI1Q9UJM3 462 aaPredicted RBP3.85□□□□□ -1.79
USP48-211ENST00000526044 RAB26Q9ULW5 256 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 LRRC42Q9Y546 428 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 FAM215AQ9Y5M1 114 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 HSPE1-MOB4S4R3N1 261 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 CACNA1BQ00975 2339 aa3.85□□□□□ -1.79
USP48-211ENST00000526044 LAMA5O15230 3695 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 PRSS37A4D1T9 235 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SNTNA6NMZ2 147 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 E9PQ18 207 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 H7C1C5 153 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 ST8SIA3O43173 380 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 DENRO43583 198 aaKnown RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 PRKYO43930 277 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SLC16A7O60669 478 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 KHDRBS3O75525 346 aaKnown RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 UPK3AO75631 287 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 TNFSF13O75888 250 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 CLIC3O95833 236 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 IGLV2-11P01706 119 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 IGHV3-9P01782 118 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 PGA4P0DJD7 388 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 PGA3P0DJD8 388 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 NR2C1P13056 603 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 MT3P25713 68 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 CRABP1P29762 137 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 GUCA1AP43080 201 aaPredicted RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 CSNK1A1P48729 337 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 CAMPP49913 170 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SLC25A1P53007 311 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 F2RL1P55085 397 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 UCP2P55851 309 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 ISL1P61371 349 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SNRPGP62308 76 aaKnown RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 LCN6P62502 163 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 CSNK2BP67870 215 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 LGALS3BPQ08380 585 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 CD47Q08722 323 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 ARL16Q0P5N6 197 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 IL24Q13007 206 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 MED21Q13503 144 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 KRR1Q13601 381 aaKnown RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 CRMP1Q14194 572 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 HIST3H3Q16695 136 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 KRTAP27-1Q3LI81 207 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 KLHL12Q53G59 568 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 MESTQ5EB52 335 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 PHYHD1Q5SRE7 291 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 TSPO2Q5TGU0 170 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 ZNF691Q5VV52 312 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 MEDAGQ5VYS4 303 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 FBXW9Q5XUX1 488 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 DNM1P34Q6PK57 102 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SLC25A47Q6Q0C1 308 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 FOXL2NBQ6ZUU3 175 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 ABHD12BQ7Z5M8 362 aaPredicted RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 TMEM219Q86XT9 240 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 CCDC71Q8IV32 467 aaPredicted RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 C8orf59Q8N0T1 100 aaPredicted RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 TMEM123Q8N131 208 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 OR6V1Q8N148 313 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 MUC20Q8N307 709 aaPredicted RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 MARVELD2Q8N4S9 558 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SPERTQ8NA61 448 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 CYB561A3Q8NBI2 242 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SLC37A3Q8NCC5 494 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SDR9C7Q8NEX9 313 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 OR2T4Q8NH00 348 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 RHOXF1Q8NHV9 184 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 ZNF519Q8TB69 540 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 FAM81AQ8TBF8 368 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 SUN5Q8TC36 379 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 RNASE8Q8TDE3 154 aaKnown RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 SGCDQ92629 289 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 NSMAFQ92636 917 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 BCL2L2Q92843 193 aaPredicted RBP3.84□□□□□ -1.79
USP48-211ENST00000526044 TMEM54Q969K7 222 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 MCHR2Q969V1 340 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 STARD4Q96DR4 205 aa3.84□□□□□ -1.79
USP48-211ENST00000526044 GRAMD2BQ96HH9 432 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms