RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 SNCBQ16143 134 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 CDONQ4KMG0 1287 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 MOGAT3Q86VF5 341 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 KLBQ86Z14 1044 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 YIPF7Q8N8F6 280 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 BHLHE23Q8NDY6 225 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 OR4M2Q8NGB6 313 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 OR8B12Q8NGG6 310 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 FBLIM1Q8WUP2 373 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 MRPL48Q96GC5 212 aaKnown RBP10.49□□□□□ -0.73
SMCO4-202ENST00000525141 TTTY10Q9BZA0 68 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 PBOV1Q9GZY1 135 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 MOB1AQ9H8S9 216 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 FGF20Q9NP95 211 aaPredicted RBP10.49□□□□□ -0.73
SMCO4-202ENST00000525141 ESM1Q9NQ30 184 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 INPP5EQ9NRR6 644 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 PCDHB10Q9UN67 800 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 MYRFQ9Y2G1 1151 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 SNX5Q9Y5X3 404 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 R4GMQ9 66 aa10.49□□□□□ -0.73
SMCO4-202ENST00000525141 hCG_38984A0A1B0GV85 526 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 IRGMA1A4Y4 181 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 CEACAM18A8MTB9 384 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 LOC110117498-PIK3R3F6TDL0 507 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 TNFRSF13BO14836 293 aaPredicted RBP10.48□□□□□ -0.73
SMCO4-202ENST00000525141 FAM20BO75063 409 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 FOXH1O75593 365 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 IGLV3-1P01715 115 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 ATP6V1B1P15313 513 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 ZNF12P17014 697 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 GATA3P23771 443 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 DCKP27707 260 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 AQP4P55087 323 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 HILS1P60008 231 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 ACTA2P62736 377 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 ACTG2P63267 376 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 PAX8Q06710 450 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 ZNF154Q13106 437 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 GALEQ14376 348 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 OR8B8Q15620 311 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 MPPED2Q15777 294 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 SMN1Q16637 294 aaKnown RBP10.48□□□□□ -0.73
SMCO4-202ENST00000525141 LYPD2Q6UXB3 125 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 USP43Q70EL4 1123 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 KRT74Q7RTS7 529 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 THAP5Q7Z6K1 395 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 ELMOD2Q8IZ81 293 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 FTMTQ8N4E7 242 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 CELF2-AS1Q8N7Q2 184 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 ZDHHC22Q8N966 263 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 SPERTQ8NA61 448 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 CSNK2A3Q8NEV1 391 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 OR56B2PQ8NGI1 322 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 OR52I1Q8NGK6 324 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 CNIH3Q8TBE1 160 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 NANPQ8TBE9 248 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 DACT3Q96B18 629 aaPredicted RBP10.48□□□□□ -0.73
SMCO4-202ENST00000525141 TMEM246Q9BRR3 403 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 JAM3Q9BX67 310 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 PLCXD1Q9NUJ7 323 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 OR52A1Q9UKL2 312 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 RRP15Q9Y3B9 282 aaKnown RBP10.48□□□□□ -0.73
SMCO4-202ENST00000525141 INSIG2Q9Y5U4 225 aa10.48□□□□□ -0.73
SMCO4-202ENST00000525141 SOX21Q9Y651 276 aaPredicted RBP10.48□□□□□ -0.73
SMCO4-202ENST00000525141 A8MXK9 166 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 IFNL4K9M1U5 179 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 RRP9O43818 475 aaKnown RBP10.47□□□□□ -0.73
SMCO4-202ENST00000525141 FSTL3O95633 263 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 TTRP02766 147 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 CA6P23280 308 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 MDH2P40926 338 aaKnown RBP10.47□□□□□ -0.73
SMCO4-202ENST00000525141 GATA4P43694 442 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 MAP2K3P46734 347 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 HSPA13P48723 471 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 SRP9P49458 86 aaKnown RBP10.47□□□□□ -0.73
SMCO4-202ENST00000525141 CSNK2BP67870 215 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 MFGE8Q08431 387 aaPredicted RBP10.47□□□□□ -0.73
SMCO4-202ENST00000525141 ZNF181Q2M3W8 571 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 FDX2Q6P4F2 183 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 ZNF841Q6ZN19 808 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 FAM220AQ7Z4H9 259 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 LHFPL3Q86UP9 236 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 CATSPERDQ86XM0 798 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 BCL6BQ8N143 479 aaPredicted RBP10.47□□□□□ -0.73
SMCO4-202ENST00000525141 SYS1Q8N2H4 156 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 KLHL36Q8N4N3 616 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 SPICQ8N5J4 248 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 C19orf18Q8NEA5 215 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 ZFAND2BQ8WV99 257 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 C22orf15Q8WYQ4 148 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 RORBQ92753 470 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 PPP1R14AQ96A00 147 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 LYZL4Q96KX0 146 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 SLC6A7Q99884 636 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 ZNF649Q9BS31 505 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 ERVK13-1Q9NX77 482 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 GNG8Q9UK08 70 aa10.47□□□□□ -0.73
SMCO4-202ENST00000525141 TMEM89A2RUT3 159 aa10.46□□□□□ -0.73
SMCO4-202ENST00000525141 ANKRD30BLA7E2S9 258 aa10.46□□□□□ -0.73
SMCO4-202ENST00000525141 MTRF1O75570 445 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms