RNA–Protein interactions for RNA: ENST00000523961.5

CCNC-216, Transcript of cyclin C, humanhuman

TSL 5

Gene CCNC, Length 1,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-216ENST00000523961 Q6ZSR3 168 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 LHFPL3Q86UP9 236 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 SYS1Q8N2H4 156 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 KLHL36Q8N4N3 616 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 CCDC54Q8NEL0 328 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 OR1M1Q8NGA1 313 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 NRG4Q8WWG1 115 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 OR5P3Q8WZ94 311 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 TFAP2CQ92754 450 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 C4orf36Q96KX1 117 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 ALG8Q9BVK2 526 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 FGF20Q9NP95 211 aaPredicted RBP10.53□□□□□ -0.72
CCNC-216ENST00000523961 C1orf123Q9NWV4 160 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 ERVK13-1Q9NX77 482 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 PIGLQ9Y2B2 252 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 V9GYS6 101 aa10.53□□□□□ -0.72
CCNC-216ENST00000523961 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.53□□□□□ -0.722e-11■■■■■ 29.2
CCNC-216ENST00000523961 FN1P02751 2386 aaKnown RBP10.52□□□□□ -0.73
CCNC-216ENST00000523961 PPIAL4EA0A075B759 164 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 hCG_1807616A0A1W2PRN6 198 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 TMEM210A6NLX4 147 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 FAM157AC9JC47 383 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 PPIAL4DF5H284 164 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 SYT7O43581 403 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 HTR1AP08908 422 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 GNAO1P09471 354 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 UBCP0CG48 685 aaKnown RBP10.52□□□□□ -0.73
CCNC-216ENST00000523961 PPIAL4FP0DN26 164 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 FAHP16930 419 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 CCL1P22362 96 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 CPT2P23786 658 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 DCKP27707 260 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 RBMXP38159 391 aaKnown RBP10.52□□□□□ -0.73
CCNC-216ENST00000523961 MRPL28Q13084 256 aaKnown RBP10.52□□□□□ -0.73
CCNC-216ENST00000523961 ZNF154Q13106 437 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 TMEM244Q5VVB8 128 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 ZNF771Q7L3S4 317 aaPredicted RBP10.52□□□□□ -0.73
CCNC-216ENST00000523961 WDR86Q86TI4 376 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 PRSS35Q8N3Z0 413 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 OR14K1Q8NGZ2 314 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 OR2G2Q8NGZ5 317 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 OR51F2Q8NH61 342 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 PELI1Q96FA3 418 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 RNF170Q96K19 258 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 JAM3Q9BX67 310 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 PPP1R3EQ9H7J1 279 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 PATZ1Q9HBE1 687 aaKnown RBP10.52□□□□□ -0.73
CCNC-216ENST00000523961 TMEM160Q9NX00 188 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 PPIAL4AQ9Y536 164 aa10.52□□□□□ -0.73
CCNC-216ENST00000523961 NSD1Q96L73 2696 aaPredicted RBP10.51□□□□□ -0.73
CCNC-216ENST00000523961 MALRD1Q5VYJ5 2156 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 SONP18583 2426 aaKnown RBP10.51□□□□□ -0.73
CCNC-216ENST00000523961 OR5B21A6NL26 309 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 ZNF205O95201 554 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 NRASP01111 189 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 MSMBP08118 114 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 ZNF12P17014 697 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 PCMT1P22061 227 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 KIR3DL2P43630 455 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 CCR9P51686 369 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 DVL1P1P54792 670 aaPredicted RBP10.51□□□□□ -0.73
CCNC-216ENST00000523961 AQP4P55087 323 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 GNG3P63215 75 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 MED21Q13503 144 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 RIPK1Q13546 671 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 ODF4Q2M2E3 257 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 CEACAM21Q3KPI0 293 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 FAM76BQ5HYJ3 339 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 FAM201AQ5SY85 155 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 CLVS2Q5SYC1 327 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 ZNF826PQ6ZT77 177 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 KCTD8Q6ZWB6 473 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 MOB3CQ70IA8 216 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 GLCCI1Q86VQ1 547 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 OR5A2Q8NGI9 324 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 HAVCR2Q8TDQ0 301 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 HPSE2Q8WWQ2 592 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 ZNF649Q9BS31 505 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 TLNRD1Q9H1K6 362 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 PLEKHA1Q9HB21 404 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 TMEM165Q9HC07 324 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 TRIM36Q9NQ86 728 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 FRRS1LQ9P0K9 344 aa10.51□□□□□ -0.73
CCNC-216ENST00000523961 SETD2Q9BYW2 2564 aaPredicted RBP10.5□□□□□ -0.73
CCNC-216ENST00000523961 C2CD3Q4AC94 2353 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 TRAV38-1A0A0B4J264 116 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 TRAV20A0A0B4J274 112 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 LOC107986453A0A1B0GWG9 222 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 EFCAB10A6NFE3 127 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 CEACAM18A8MTB9 384 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 LGALS8O00214 317 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 CRLF1O75462 422 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 LIMS3P0CW19 117 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 LIMS4P0CW20 117 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 MYL12AP19105 171 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 THBS2P35442 1172 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 CFHR2P36980 270 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 GPM6AP51674 278 aa10.5□□□□□ -0.73
CCNC-216ENST00000523961 GBX2P52951 348 aaPredicted RBP10.5□□□□□ -0.73
CCNC-216ENST00000523961 CSNK2BP67870 215 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms