RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 PITX2Q99697 317 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 PRSS27Q9BQR3 290 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 TMEM246Q9BRR3 403 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 FNDC11Q9BVV2 318 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 ULBP2Q9BZM5 246 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 OR2J1Q9GZK6 312 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 SMURF2Q9HAU4 748 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 CACYBPQ9HB71 228 aaKnown RBP5.41□□□□□ -1.54
SDCBP-210ENST00000522843 MRPS18AQ9NVS2 196 aaKnown RBP5.41□□□□□ -1.54
SDCBP-210ENST00000522843 TMEM38BQ9NVV0 291 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 SLC13A4Q9UKG4 626 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 TMCC3Q9ULS5 477 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 U3KQK5 164 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 ABCA13Q86UQ4 5058 aa5.41□□□□□ -1.54
SDCBP-210ENST00000522843 LOC100509620A0A075B734 347 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 A0A087WUU8 490 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 A0A0B4J2E0 115 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 TRBV4-1A0A0J9YWV2 114 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 A0A1B0GX12 115 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 PLSCR5A0PG75 271 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 TRAPPC13A5PLN9 417 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 PRSS29PA6NIE9 313 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF879B4DU55 563 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 P2RY10O00398 339 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 FCN3O75636 299 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 DIRAS1O95057 198 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 CCNB2O95067 398 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 CHRM2P08172 466 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 CD28P10747 220 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 GSTM3P21266 225 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 GABRA5P31644 462 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 RBM34P42696 430 aaKnown RBP5.4□□□□□ -1.54
SDCBP-210ENST00000522843 GSSP48637 474 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 CDH12P55289 794 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 RGS8P57771 180 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-210ENST00000522843 EFNB1P98172 346 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 HOXA4Q00056 320 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-210ENST00000522843 HOXC5Q00444 222 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 PSG7Q13046 419 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 SEC23BQ15437 767 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 OR1Q1Q15612 314 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 TBC1D28Q2M2D7 210 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF718Q3SXZ3 478 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 SLC25A30Q5SVS4 291 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF691Q5VV52 312 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 WDR25Q64LD2 544 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-210ENST00000522843 SLC27A4Q6P1M0 643 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 TMPRSS11FQ6ZWK6 438 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 MBOAT2Q6ZWT7 520 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 H1FNTQ75WM6 255 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-210ENST00000522843 RANBP3LQ86VV4 465 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-210ENST00000522843 PDZD9Q8IXQ8 264 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 HS3ST5Q8IZT8 346 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 CLDN22Q8N7P3 220 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 OR10G2Q8NGC3 310 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 OR6N1Q8NGY5 312 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 ZNF420Q8TAQ5 688 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-210ENST00000522843 DNAJA4Q8WW22 397 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-210ENST00000522843 ITLN1Q8WWA0 313 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 TRUB1Q8WWH5 349 aaKnown RBP5.4□□□□□ -1.54
SDCBP-210ENST00000522843 LIPHQ8WWY8 451 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 ACOT11Q8WXI4 607 aaPredicted RBP5.4□□□□□ -1.54
SDCBP-210ENST00000522843 POM121L2Q96KW2 1035 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 SNX22Q96L94 193 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 SAMD8Q96LT4 415 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 MBOAT4Q96T53 435 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 MCHR1Q99705 422 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 SLC19A3Q9BZV2 496 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 SIRPDQ9H106 197 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 TMEM27Q9HBJ8 222 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 VPREB3Q9UKI3 123 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 ORC6Q9Y5N6 252 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 U3KQV3 271 aa5.4□□□□□ -1.54
SDCBP-210ENST00000522843 A0A087WUJ7 227 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 LRRN3E7EW58 273 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 RNASEK-C17orf49H0YIS7 233 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 M0R3H8 397 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 CHP2O43745 196 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 MRPS14O60783 128 aaKnown RBP5.39□□□□□ -1.55
SDCBP-210ENST00000522843 PTP4A3O75365 173 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 CYB5R3P00387 301 aaPredicted RBP5.39□□□□□ -1.55
SDCBP-210ENST00000522843 LYNP07948 512 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 CCNOP22674 350 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 FPR3P25089 353 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 HTR2AP28223 471 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 RPL4P36578 427 aaKnown RBP5.39□□□□□ -1.55
SDCBP-210ENST00000522843 TGFBR2P37173 567 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 YAP1P46937 504 aaKnown RBP5.39□□□□□ -1.55
SDCBP-210ENST00000522843 OMPP47874 163 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 CSNK1A1P48729 337 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 PITPNBP48739 271 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 CRISP1P54107 249 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 TAS2R41P59536 307 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 CDK5Q00535 292 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 SPIBQ01892 262 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 PRKCDQ05655 676 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 PPP1R8Q12972 351 aaKnown RBP5.39□□□□□ -1.55
SDCBP-210ENST00000522843 TSPAN31Q12999 210 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF404Q494X3 552 aa5.39□□□□□ -1.55
SDCBP-210ENST00000522843 ANKDD1AQ495B1 522 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms