RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 QPCTLQ9NXS2 382 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 PSORS1C1Q9UIG5 152 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 ZNF346Q9UL40 294 aaKnown RBP3.3□□□□□ -1.88
CLK4-207ENST00000520909 RASD1Q9Y272 281 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 TP53TG5Q9Y2B4 290 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 B3GALT5Q9Y2C3 310 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 SNX5Q9Y5X3 404 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 LIPGQ9Y5X9 500 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 MPDZO75970 2070 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 DSPP15924 2871 aaKnown RBP3.3□□□□□ -1.88
CLK4-207ENST00000520909 CACNA1BQ00975 2339 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 DNAJC13O75165 2243 aa3.3□□□□□ -1.88
CLK4-207ENST00000520909 RP1L1Q8IWN7 2480 aaPredicted RBP3.3□□□□□ -1.88
CLK4-207ENST00000520909 ZNF407Q9C0G0 2248 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 FREM3P0C091 2139 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 A0A087WV48 116 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 MED19A0JLT2 244 aaPredicted RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 IRGMA1A4Y4 181 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 PRSS37A4D1T9 235 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 CCDC182A6NF36 153 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 ZNF726A6NNF4 738 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 NPIPA2E9PIF3 369 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 NPIPA3F8WFD2 350 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 H7C1C5 153 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 RAMP1O60894 148 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 VAMP5O95183 116 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 RAB36O95755 333 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 FADS2O95864 444 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 BCL10O95999 233 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 ACTL6AO96019 429 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 IGHMP01871 453 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 GYPBP06028 91 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 CDK1P06493 297 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 HTR1AP08908 422 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 CLUP10909 449 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 DBTP11182 482 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 ZNF43P17038 809 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 SPI1P17947 270 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 SLC15A1P46059 708 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 RPL5P46777 297 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 DAP3P51398 398 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 P2RY4P51582 365 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 SLC25A1P53007 311 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 SUCLG1P53597 346 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 CASP6P55212 293 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 BIDP55957 195 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 RPS3AP61247 264 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 LCN6P62502 163 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 SLC35A2P78381 396 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 CAMK2DQ13557 499 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 PON3Q15166 354 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 NEDD8Q15843 81 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 BCL2A1Q16548 175 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 C3AR1Q16581 482 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 SOWAHCQ53LP3 525 aaPredicted RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 MESTQ5EB52 335 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 ARMC4Q5T2S8 1044 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 NXNL2Q5VZ03 156 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 CARD17Q5XLA6 110 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 FAM205BPQ63HN1 556 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 NIPAL3Q6P499 406 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 Q6ZS92 163 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 PRSS48Q7RTY5 328 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 ADCK1Q86TW2 530 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 SYT14Q8NB59 555 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 PROKR2Q8NFJ6 384 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 OR4F15Q8NGB8 312 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 OR9K2Q8NGE7 335 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 OR51L1Q8NGJ5 315 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 OR52I1Q8NGK6 324 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 OR6K6Q8NGW6 343 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 C9orf43Q8TAL5 461 aaPredicted RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 NEIL3Q8TAT5 605 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 ZNF519Q8TB69 540 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 ZMYND19Q96E35 227 aaPredicted RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 TMEM80Q96HE8 168 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 TSSK2Q96PF2 358 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 TAAR6Q96RI8 345 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 DDOQ99489 341 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 TEAD3Q99594 435 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 EMC6Q9BV81 110 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 PRRG4Q9BZD6 226 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 NMNAT2Q9BZQ4 307 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 PIGMQ9H3S5 423 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 ZDHHC11Q9H8X9 412 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 VCX3AQ9NNX9 186 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 CCNB1IP1Q9NPC3 277 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 RPRD1BQ9NQG5 326 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 FKBP14Q9NWM8 211 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 CHCHD3Q9NX63 227 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 MED29Q9NX70 200 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 CNOT2Q9NZN8 540 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 RCC2Q9P258 522 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 B3GAT1Q9P2W7 334 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 SPRR3Q9UBC9 169 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 WARS2Q9UGM6 360 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 COMMD3-BMI1R4GMX3 469 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 TLN1Q9Y490 2541 aaKnown RBP3.29□□□□□ -1.88
CLK4-207ENST00000520909 ACACBO00763 2458 aa3.29□□□□□ -1.88
CLK4-207ENST00000520909 PKD1L2Q7Z442 2459 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms