RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 KLRC4-KLRK1H3BQV0 150 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 M0R296 226 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 PIRO00625 290 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 FOXS1O43638 330 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 PDE6DO43924 150 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR1I1O60431 355 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 TBX19O60806 448 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 RAD51DO75771 328 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CNMDO75829 334 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 B3GAT3O94766 335 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 GASTP01350 101 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 HSPB1P04792 205 aaKnown RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 H1F0P07305 194 aaKnown RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CHRM2P08172 466 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 LIMS3P0CW19 117 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 LIMS4P0CW20 117 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 VSIG10L2P0DP72 767 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 PTHLHP12272 177 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CTSEP14091 401 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 PRPH2P23942 346 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 F2RP25116 425 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CTSSP25774 331 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 GCH1P30793 250 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 HTR1FP30939 366 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 SOAT1P35610 550 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 TIMP3P35625 211 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 THPOP40225 353 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 NPBWR2P48146 333 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 HNRNPA3P51991 378 aaKnown RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 MVDP53602 400 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CRYBA4P53673 196 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 GAS1P54826 345 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 HMGCS2P54868 508 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 FOXA1P55317 472 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CKS1BP61024 79 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 C17orf67Q0P5P2 114 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 HYAL1Q12794 435 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 PMS2P11Q13670 270 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 ENDOGQ14249 297 aaKnown RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 HIST3H3Q16695 136 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 PCK2Q16822 640 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CDO1Q16878 200 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 ARHGAP11BQ3KRB8 267 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 COX19Q49B96 90 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 ACSM3Q53FZ2 586 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 LRRC10Q5BKY1 277 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 DCAF12L2Q5VW00 463 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CARD17Q5XLA6 110 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR4A47Q6IF82 309 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF770Q6IQ21 691 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 REEP3Q6NUK4 255 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 Q6ZRG5 221 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF621Q6ZSS3 439 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 LRRC70Q7Z2Q7 622 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 MRGPREQ86SM8 312 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 GPSM1Q86YR5 675 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CALHM1Q8IU99 346 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 TUSC5Q8IXB3 177 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CFAP52Q8N1V2 620 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 RYBPQ8N488 228 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM229BQ8NBD8 167 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 SIDT2Q8NBJ9 832 aaKnown RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CHST4Q8NCG5 386 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 ACVR1CQ8NER5 493 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR4P4Q8NGL7 312 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR5AK3PQ8NH89 298 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC2A12Q8TD20 617 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 Q8WTZ3 238 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM170AQ8WVE7 144 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 PINX1Q96BK5 328 aaKnown RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CXorf40BQ96DE9 158 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 RBMXL1Q96E39 390 aaKnown RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 MRAP2Q96G30 205 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 THOC3Q96J01 351 aaKnown RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 OR10C1Q96KK4 312 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 C12orf42Q96LP6 360 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 GNRHR2Q96P88 292 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 TBX15Q96SF7 602 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 MACROD1Q9BQ69 325 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 GINS3Q9BRX5 216 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 ZNF649Q9BS31 505 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 PSMG3Q9BT73 122 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CABLES2Q9BTV7 478 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 MAP1LC3BQ9GZQ8 125 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 WDR13Q9H1Z4 485 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 P2RY12Q9H244 342 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 CHODLQ9H9P2 273 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 NOX4Q9NPH5 578 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 TMEM38BQ9NVV0 291 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 PLEKHJ1Q9NW61 149 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 TRMT112Q9UI30 125 aaKnown RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 MSRAQ9UJ68 235 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 SLC13A4Q9UKG4 626 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 RAB22AQ9UL26 194 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 MRPS28Q9Y2Q9 187 aaKnown RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 AK6Q9Y3D8 172 aaKnown RBP4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 NEUROG3Q9Y4Z2 214 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 LRP12Q9Y561 859 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 HS3ST3A1Q9Y663 406 aa4.27□□□□□ -1.73
HMGB1P19-201ENST00000517578 MRPS18BQ9Y676 258 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms