RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 ANXA2P2A6NMY6 339 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 GABRPO00591 440 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 IGHV1-46P01743 117 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 CD55P08174 381 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 FSTP19883 344 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 INSL4Q14641 139 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 FAM209AQ5JX71 171 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 ZNF529Q6P280 563 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 CEACAM19Q7Z692 300 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 OR2Z1Q8NG97 314 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 OR10AD1Q8NGE0 317 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 OR5P3Q8WZ94 311 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 ITPKCQ96DU7 683 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 ELMOD3Q96FG2 381 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 ZCCHC4Q9H5U6 513 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 CKLFQ9UBR5 152 aa17.85■□□□□ 0.45
LSM6-207ENST00000515311 AKAP6Q13023 2319 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 SPRY3O43610 288 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 GPX5O75715 221 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 ALX3O95076 343 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 UCHL1P09936 223 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 TNFSF4P23510 183 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 CRYBB2P43320 205 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 MZT1Q08AG7 82 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 CEACAM21Q3KPI0 293 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 TIMM50Q3ZCQ8 353 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 PLCXD3Q63HM9 321 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 GPR141Q7Z602 305 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 OR8S1Q8NH09 359 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 CXorf56Q9H5V9 222 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 PPP1R3EQ9H7J1 279 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 NOX4Q9NPH5 578 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 CACNA1DQ01668 2161 aa17.84■□□□□ 0.45
LSM6-207ENST00000515311 ASH1LQ9NR48 2969 aaKnown RBP17.84■□□□□ 0.45
LSM6-207ENST00000515311 OR5B21A6NL26 309 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 H0YL77 283 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 PIN1P1O15428 100 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 ARL6IP5O75915 188 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 ERCC1P07992 297 aaPredicted RBP17.83■□□□□ 0.44
LSM6-207ENST00000515311 GADD45AP24522 165 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 FGF9P31371 208 aaPredicted RBP17.83■□□□□ 0.44
LSM6-207ENST00000515311 CNN3Q15417 329 aaKnown RBP17.83■□□□□ 0.44
LSM6-207ENST00000515311 UBE2V2Q15819 145 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 ASPHD2Q6ICH7 369 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 CELF2-AS1Q8N7Q2 184 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 OR5A2Q8NGI9 324 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 HPSE2Q8WWQ2 592 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 TMIGD2Q96BF3 282 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 HIST1H2AAQ96QV6 131 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 MICU1Q9BPX6 476 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 RTL8AQ9BWD3 113 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 RAB1BQ9H0U4 201 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 CXXC4Q9H2H0 198 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 LIME1Q9H400 295 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 GPR173Q9NS66 373 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 C14orf119Q9NWQ9 140 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 IL19Q9UHD0 177 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 FOXJ3Q9UPW0 622 aa17.83■□□□□ 0.44
LSM6-207ENST00000515311 SPG11Q96JI7 2443 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 SULT1B1O43704 296 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 IGFBP3P17936 291 aaPredicted RBP17.82■□□□□ 0.44
LSM6-207ENST00000515311 ATF1P18846 271 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 RAB3AP20336 220 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 CD200P41217 278 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 PPP3R1P63098 170 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 TNFAIP6P98066 277 aaPredicted RBP17.82■□□□□ 0.44
LSM6-207ENST00000515311 TESK1Q15569 626 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 HSD17B12Q53GQ0 312 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 CEP78Q5JTW2 689 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 GDPGP1Q6ZNW5 385 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 MOB3CQ70IA8 216 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 ZCCHC24Q8N2G6 241 aaKnown RBP17.82■□□□□ 0.44
LSM6-207ENST00000515311 OR13C9Q8NGT0 318 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 NRGNQ92686 78 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 DVL3Q92997 716 aaPredicted RBP17.82■□□□□ 0.44
LSM6-207ENST00000515311 SPSB1Q96BD6 273 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 VRK1Q99986 396 aaPredicted RBP17.82■□□□□ 0.44
LSM6-207ENST00000515311 EGLN1Q9GZT9 426 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 TPK1Q9H3S4 243 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 NEK6Q9HC98 313 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 TAS2R4Q9NYW5 299 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 SSR3Q9UNL2 185 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 SLC7A11Q9UPY5 501 aa17.82■□□□□ 0.44
LSM6-207ENST00000515311 ANKRD17O75179 2603 aaKnown RBP17.81■□□□□ 0.44
LSM6-207ENST00000515311 IGKV1-9A0A0C4DH69 117 aa17.81■□□□□ 0.44
LSM6-207ENST00000515311 A0A1W2PPK0 400 aa17.81■□□□□ 0.44
LSM6-207ENST00000515311 F5H5P2 479 aa17.81■□□□□ 0.44
LSM6-207ENST00000515311 PTBP3O95758 552 aaKnown RBP17.81■□□□□ 0.44
LSM6-207ENST00000515311 PRKACBP22694 351 aa17.81■□□□□ 0.44
LSM6-207ENST00000515311 SRP9P49458 86 aaKnown RBP17.81■□□□□ 0.44
LSM6-207ENST00000515311 FAM27D1Q5T7N8 215 aa17.81■□□□□ 0.44
LSM6-207ENST00000515311 DNAAF1Q8NEP3 725 aa17.81■□□□□ 0.44
LSM6-207ENST00000515311 OR1M1Q8NGA1 313 aa17.81■□□□□ 0.44
LSM6-207ENST00000515311 TRMT61AQ96FX7 289 aaKnown RBP17.81■□□□□ 0.44
LSM6-207ENST00000515311 OR2V2Q96R30 315 aa17.81■□□□□ 0.44
LSM6-207ENST00000515311 FUNDC2Q9BWH2 189 aa17.81■□□□□ 0.44
LSM6-207ENST00000515311 OR51E2Q9H255 320 aa17.81■□□□□ 0.44
LSM6-207ENST00000515311 PPIL3Q9H2H8 161 aaKnown RBP17.81■□□□□ 0.44
LSM6-207ENST00000515311 TRAV8-7A0A075B6U6 113 aa17.8■□□□□ 0.44
LSM6-207ENST00000515311 TMEM210A6NLX4 147 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms