RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 SLC7A7Q9UM01 511 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 NOP16Q9Y3C1 178 aaKnown RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 DNAH6Q9C0G6 4158 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 IGKV1D-17A0A075B6S4 117 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 TLDC2A0PJX2 215 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 CENPBD1B2RD01 187 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 E9PBE3 544 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 M0R2N4 97 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 CHP2O43745 196 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 TIPRLO75663 272 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ANP32DO95626 131 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ALDOCP09972 364 aaKnown RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 ZNF823P16415 610 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 BRS3P32247 399 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 S100A3P33764 101 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 CENPAP49450 140 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 IL18R1Q13478 541 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 GPR50Q13585 617 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 PNLIPRP3Q17RR3 467 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 RSPO1Q2MKA7 263 aaPredicted RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 SNAI3Q3KNW1 292 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ZDHHC24Q6UX98 284 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 KCTD8Q6ZWB6 473 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 LYPD6Q86Y78 171 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 FOXRED2Q8IWF2 684 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 BATF2Q8N1L9 274 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 COMMD1Q8N668 190 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 SMYD1Q8NB12 490 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 SPATA4Q8NEY3 305 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 OR1M1Q8NGA1 313 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 PFN4Q8NHR9 129 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 RPL3LQ92901 407 aaKnown RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 OR4C12Q96R67 309 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 OR52E6Q96RD3 313 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 MCHR1Q99705 422 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 PARD6BQ9BYG5 372 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 ALX4Q9H161 411 aaPredicted RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 C1orf21Q9H246 121 aa2.5□□□□□ -2.01
CHD1-211ENST00000514344 MEPEQ9NQ76 525 aaPredicted RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 PAPOLBQ9NRJ5 636 aaKnown RBP2.5□□□□□ -2.01
CHD1-211ENST00000514344 GMNCA6NCL1 334 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 C5orf58C9J3I9 102 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 M0QZK8 103 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 RFXANKO14593 260 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 SLC22A2O15244 555 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 RTL8CO15255 209 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 SHOXO15266 292 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 HSPA12AO43301 675 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 SPAG7O75391 227 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 GLRA1P23415 457 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 HTR1DP28221 377 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 SDHAP31040 664 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 GNALP38405 381 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 NAA10P41227 235 aaPredicted RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 GNB1P62873 340 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 MXRA7P84157 204 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 MFGE8Q08431 387 aaPredicted RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 TRIM25Q14258 630 aaKnown RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 HES1Q14469 280 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 KRT71Q3SY84 523 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 ALG10Q5BKT4 473 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 GTSCR1Q86UQ5 136 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 OR11H6Q8NGC7 330 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 SLC35B4Q969S0 331 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 RAB3IPQ96QF0 476 aaPredicted RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 GNB4Q9HAV0 340 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 STX18Q9P2W9 335 aaKnown RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 NLKQ9UBE8 527 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 MOB4Q9Y3A3 225 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 HSPE1-MOB4S4R3N1 261 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 IGHV2-26A0A0B4J1V2 119 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 C16orf90A8MZG2 172 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 CDK2AP2O75956 126 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 KRT75O95678 551 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 ACSM4P0C7M7 580 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 PSG2P11465 335 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 CPA3P15088 417 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 SLC9A3P48764 834 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 EDDM3BP56851 147 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 CTXN1P60606 82 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 RPL27P61353 136 aaKnown RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 ENTPD8Q5MY95 495 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 ACSM6Q6P461 480 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 LINC00114Q6XXX2 140 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 ZNF662Q6ZS27 426 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 FOXL2NBQ6ZUU3 175 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 TSEN54Q7Z6J9 526 aaKnown RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 THAP5Q7Z6K1 395 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 TSPYL5Q86VY4 417 aaPredicted RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 ANKRD13BQ86YJ7 626 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 RBM45Q8IUH3 476 aaKnown RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 LINC00346Q8IVM7 164 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 ZNF676Q8N7Q3 588 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 PHLDA1Q8WV24 401 aaPredicted RBP2.49□□□□□ -2.01
CHD1-211ENST00000514344 ALG12Q9BV10 488 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 HDHD2Q9H0R4 259 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 DNTTIP1Q9H147 329 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 WFDC10AQ9H1F0 79 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 RAD21L1Q9H4I0 556 aa2.49□□□□□ -2.01
CHD1-211ENST00000514344 TPT1P8Q9HAU6 139 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms