RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TMED3Q9Y3Q3 217 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 V9GYS6 101 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 SHROOM3Q8TF72 1996 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 TO15178 435 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 CTSVO60911 334 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 FAM157BP0CG42 384 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 ZNF141Q15928 474 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 FXNQ16595 210 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 CADM4Q8NFZ8 388 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 MRPS24Q96EL2 167 aaKnown RBP11.19□□□□□ -0.62
COL11A1-210ENST00000512756 ALG1L2C9J202 215 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 LY86O95711 162 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 CYC1P08574 325 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 HIST1H1DP16402 221 aaKnown RBP11.19□□□□□ -0.62
COL11A1-210ENST00000512756 CDAP32320 146 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 CDONQ4KMG0 1287 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 AKR7LQ8NHP1 331 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 ROBO4Q8WZ75 1007 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 EID2BQ96D98 161 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 ZC3HAV1LQ96H79 300 aaKnown RBP11.19□□□□□ -0.62
COL11A1-210ENST00000512756 FOXQ1Q9C009 403 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 ZNF586Q9NXT0 402 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 KIAA1456Q9P272 454 aa11.19□□□□□ -0.62
COL11A1-210ENST00000512756 TNRC6CQ9HCJ0 1690 aaKnown RBP11.19□□□□□ -0.62
COL11A1-210ENST00000512756 KIAA0100Q14667 2235 aaKnown RBP11.19□□□□□ -0.62
COL11A1-210ENST00000512756 PGA3P0DJD8 388 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 ERGIC1Q969X5 290 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 TMEM18Q96B42 140 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 ATP23Q9Y6H3 246 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 COL18A1P39060 1754 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 CHEK1O14757 476 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 ANGPTL7O43827 346 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 SULT1A3P0DMM9 295 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 SULT1A4P0DMN0 295 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 CTRB1P17538 263 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 ST3GAL2Q16842 350 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 CTRB2Q6GPI1 263 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 MOB1BQ7L9L4 216 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 FBXL14Q8N1E6 418 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 OR5V1Q9UGF6 321 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 DOCK2Q92608 1830 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 TMEM272A0A1B0GTI8 110 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 OR2W5A6NFC9 320 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 RNASEK-C17orf49H0YIS7 233 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 SPRY1O43609 319 aaPredicted RBP11.18□□□□□ -0.62
COL11A1-210ENST00000512756 PIAS2O75928 621 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 TXNDC12O95881 172 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 SPP1P10451 314 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 AMER3Q8N944 861 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 TTC3P53804 2025 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 G3V3Q6 166 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 OR7C2O60412 319 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 OR5G3P0C626 314 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 TRA2AQ13595 282 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL11A1-210ENST00000512756 DUSP18Q8NEJ0 188 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 ALKBH3Q96Q83 286 aaPredicted RBP11.18□□□□□ -0.62
COL11A1-210ENST00000512756 ACSM4P0C7M7 580 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 SLC25A6P12236 298 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 KISS1Q15726 138 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 ZIC1Q15915 447 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 GSG1Q2KHT4 349 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 PDZD11Q5EBL8 140 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 GPBAR1Q8TDU6 330 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 COX14Q96I36 57 aa11.18□□□□□ -0.62
COL11A1-210ENST00000512756 CTAG2O75638 210 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 DHRS3O75911 302 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 GNG3P63215 75 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 ADPRHL1Q8NDY3 354 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 DEFB108BQ8NET1 73 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 VN1R1Q9GZP7 353 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 ZNF768Q9H5H4 540 aaKnown RBP11.17□□□□□ -0.62
COL11A1-210ENST00000512756 SIRT3Q9NTG7 399 aaPredicted RBP11.17□□□□□ -0.62
COL11A1-210ENST00000512756 FBXO4Q9UKT5 387 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 NHSL1Q5SYE7 1610 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 CACNA1CQ13936 2221 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 TMEM30CPA0ZSE6 113 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 C2CD4DB7Z1M9 353 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 SFT2D2O95562 160 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 CCL7P80098 99 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 DHRS2Q13268 280 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 RPL7L1Q6DKI1 246 aaKnown RBP11.17□□□□□ -0.62
COL11A1-210ENST00000512756 ZNF574Q6ZN55 896 aaPredicted RBP11.17□□□□□ -0.62
COL11A1-210ENST00000512756 Q7L0L9 218 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 PHYHIPLQ96FC7 376 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 MAP6Q96JE9 813 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 FAM173AQ9BQD7 235 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 NMES1Q9C002 83 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 GAR1Q9NY12 217 aaKnown RBP11.17□□□□□ -0.62
COL11A1-210ENST00000512756 XKRY2A2RUG3 117 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 CRYM-AS1A6NIL9 109 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 RPS16P62249 146 aaKnown RBP11.17□□□□□ -0.62
COL11A1-210ENST00000512756 FAM219BQ5XKK7 198 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 UBE3DQ7Z6J8 389 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 SIGLECL1Q8N7X8 197 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 ZG16BQ96DA0 208 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 PIK3IP1Q96FE7 263 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 MMP26Q9NRE1 261 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 ST8SIA5O15466 376 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 TMEM88Q6PEY1 159 aa11.17□□□□□ -0.62
COL11A1-210ENST00000512756 PRSS42Q7Z5A4 293 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms