RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 C1orf174Q8IYL3 243 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 C11orf42Q8N5U0 333 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 TMEM35BQ8NCS4 154 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 MORN4Q8NDC4 146 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 OR5T3Q8NGG3 340 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 OR52E2Q8NGJ4 325 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 OR2A1Q8NGT9 310 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 NUBPLQ8TB37 319 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF75CPQ92670 426 aaPredicted RBP2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 UPRTQ96BW1 309 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 SLC41A3Q96GZ6 507 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 VSIG2Q96IQ7 327 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 DNAJC1Q96KC8 554 aaKnown RBP2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 C4orf36Q96KX1 117 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 COPS8Q99627 209 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 TRABDQ9H4I3 376 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 ACP6Q9NPH0 428 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 MIEF1Q9NQG6 463 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF275Q9NSD4 429 aaPredicted RBP2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 VNN3Q9NY84 501 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 RNF14Q9UBS8 474 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 PCSK1NQ9UHG2 260 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 MRPS33Q9Y291 106 aaKnown RBP2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 MMACHCQ9Y4U1 282 aa2.52□□□□□ -2.01
TOPBP1-208ENST00000511439 TRAV40A0A0B4J280 105 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 OR5H1A6NKK0 313 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 SDHDO14521 159 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 CHST10O43529 356 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 SNNO75324 88 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 FOXH1O75593 365 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 LYZL6O75951 148 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 AQP8O94778 261 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 AGTP01019 485 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 IGHV2-5P01817 119 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 OPN1LWP04000 364 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 RHOXF2BP0C7M4 288 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 SLC35G6P0C7Q6 338 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 P0C879 139 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 PABPC4LP0CB38 370 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 DBTP11182 482 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 GZMAP12544 262 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 RNH1P13489 461 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF44P15621 663 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF17P17021 662 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 GGT1P19440 569 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 AGTR1P30556 359 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 RPA3P35244 121 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 RGS4P49798 205 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 LCN2P80188 198 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 BDH1Q02338 343 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF154Q13106 437 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 DPYSL3Q14195 570 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 KCNJ11Q14654 390 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 PPP1R7Q15435 360 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 LINC01620Q4KN68 170 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 METTL11BQ5VVY1 283 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 RSBN1Q5VWQ0 802 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 TTC23LQ6PF05 361 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 TFAP2EQ6VUC0 442 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 GLT6D1Q7Z4J2 308 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 SPERTQ8NA61 448 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 OR13F1Q8NGS4 319 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 AKR7LQ8NHP1 331 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 PNPT1Q8TCS8 783 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 SPRYD4Q8WW59 207 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 IL1F10Q8WWZ1 152 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 ELMO1Q92556 727 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 RDH5Q92781 318 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 EMG1Q92979 244 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 RASD2Q96D21 266 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 TIMD4Q96H15 378 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 EBNA1BP2Q99848 306 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 LLPHQ9BRT6 129 aaKnown RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 OR8D2Q9GZM6 311 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 TMEM165Q9HC07 324 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 CRLF2Q9HC73 371 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 MMP26Q9NRE1 261 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 ETNK2Q9NVF9 386 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 CHRNA9Q9UGM1 479 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 DKKL1Q9UK85 242 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 PSME2Q9UL46 239 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 SOX21Q9Y651 276 aaPredicted RBP2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 SLC22A7Q9Y694 548 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 RNF213Q63HN8 5207 aa2.51□□□□□ -2.01
TOPBP1-208ENST00000511439 ARFGEF3Q5TH69 2177 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 IGKV1-8A0A0C4DH67 115 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 HELTA6NFD8 242 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF716A6NP11 495 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 ATP6V1G2-DDX39BF2Z307 99 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 RNASEK-C17orf49H0YIS7 233 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 BOLA2-SMG1P6H3BVE0 249 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 hCG_2039718K7EN88 272 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 HAT1O14929 419 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 ZNF208O43345 1280 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 TPST2O60704 377 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 BCAS1O75363 584 aaPredicted RBP2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 STX11O75558 287 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 CBR3O75828 277 aa2.5□□□□□ -2.01
TOPBP1-208ENST00000511439 SRP72O76094 671 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms