RNA–Protein interactions for RNA: ENST00000509601.1

TPM3-220, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 543 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-220ENST00000509601 G3V2T6 193 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 CLDN34H7C241 214 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 SFTPBP07988 381 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 DCTDP32321 178 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 MTNR1AP48039 350 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 TGM4P49221 684 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 IL5RAQ01344 420 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 ROM1Q03395 351 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 SNCBQ16143 134 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 MICBQ29980 383 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 ATPAF1Q5TC12 328 aaPredicted RBP14.84□□□□□ -0.03
TPM3-220ENST00000509601 AADACL4Q5VUY2 407 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 SLX4IPQ5VYV7 408 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 KDM4DQ6B0I6 523 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 KCTD18Q6PI47 426 aaPredicted RBP14.84□□□□□ -0.03
TPM3-220ENST00000509601 BRD3OSQ6XYD6 125 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 MEPCEQ7L2J0 689 aaKnown RBP14.84□□□□□ -0.03
TPM3-220ENST00000509601 AMIGO2Q86SJ2 522 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 C3orf56Q8N813 242 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 OR10Z1Q8NGY1 313 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 HPSE2Q8WWQ2 592 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 RPL3LQ92901 407 aaKnown RBP14.84□□□□□ -0.03
TPM3-220ENST00000509601 RNF170Q96K19 258 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 ZNF391Q9UJN7 358 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 AP4S1Q9Y587 144 aa14.84□□□□□ -0.03
TPM3-220ENST00000509601 A0A0U1RQV5 110 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 CENPVL3A0A0U1RRI6 287 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 MDFIC2A0A1B0GVS7 189 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 TMEM269A0A1B0GVZ9 245 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 ANXA2P2A6NMY6 339 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 ZAR1LA6NP61 321 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 M0R129 80 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 TMPRSS2O15393 492 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 ATP5HO75947 161 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 IGLV3-1P01715 115 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 RNASE1P07998 156 aaKnown RBP14.83□□□□□ -0.04
TPM3-220ENST00000509601 FASP25445 335 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 RASSF2P50749 326 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 DEFB112Q30KQ8 113 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 C11orf91Q3C1V1 193 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 WDR38Q5JTN6 314 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 C12orf73Q69YU5 71 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 ZNF679Q8IYX0 411 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 FTMTQ8N4E7 242 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 TCEANCQ8N8B7 351 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 SCCPDHQ8NBX0 429 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 WDFY2Q96P53 400 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 OR8B4Q96RC9 309 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 PKP2Q99959 881 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 PCGF1Q9BSM1 259 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 RTL8AQ9BWD3 113 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 MROQ9BYG7 248 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 PBOV1Q9GZY1 135 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 GABARAPL1Q9H0R8 117 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 SIRPDQ9H106 197 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 WDR13Q9H1Z4 485 aa14.83□□□□□ -0.04
TPM3-220ENST00000509601 TMEM210A6NLX4 147 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 P2RY10O00398 339 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 MAGEB4O15481 346 aaPredicted RBP14.82□□□□□ -0.04
TPM3-220ENST00000509601 ZNF254O75437 659 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 SRSF10O75494 262 aaKnown RBP14.82□□□□□ -0.04
TPM3-220ENST00000509601 TOX4O94842 621 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 ECDO95905 644 aaPredicted RBP14.82□□□□□ -0.04
TPM3-220ENST00000509601 BPIFB3P59826 476 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 ARF6P62330 175 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 LCN1P1Q5VSP4 162 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 PNLDC1Q8NA58 520 aaKnown RBP14.82□□□□□ -0.04
TPM3-220ENST00000509601 LY6G5BQ8NDX9 201 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 OR5T2Q8NGG2 359 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 TMEM163Q8TC26 289 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 LRTOMTQ8WZ04 291 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 TAF15Q92804 592 aaKnown RBP eCLIP14.82□□□□□ -0.04
TPM3-220ENST00000509601 C12orf43Q96C57 262 aaKnown RBP14.82□□□□□ -0.04
TPM3-220ENST00000509601 ZMAT3Q9HA38 289 aaKnown RBP14.82□□□□□ -0.04
TPM3-220ENST00000509601 ABCB9Q9NP78 766 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 KRT84Q9NSB2 600 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 HAO2Q9NYQ3 351 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 CMYA5Q8N3K9 4069 aa14.82□□□□□ -0.04
TPM3-220ENST00000509601 POLR2IP36954 125 aaKnown RBP14.81□□□□□ -0.04
TPM3-220ENST00000509601 MAP2K3P46734 347 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 FOXL1Q12952 345 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 GPR157Q5UAW9 335 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 C1orf146Q5VVC0 180 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 NXNL2Q5VZ03 156 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 RUSC1-AS1Q66K80 236 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 ZDHHC23Q8IYP9 409 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 FAM216BQ8N7L0 139 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 ASB17Q8WXJ9 295 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 RAB3IPQ96QF0 476 aaPredicted RBP14.81□□□□□ -0.04
TPM3-220ENST00000509601 APOL4Q9BPW4 351 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 TTTY10Q9BZA0 68 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 OR51I2Q9H344 312 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 CNTD2Q9H8S5 307 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 ADGRL4Q9HBW9 690 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 RPUSD1Q9UJJ7 312 aaKnown RBP14.81□□□□□ -0.04
TPM3-220ENST00000509601 TMEM14AQ9Y6G1 99 aa14.81□□□□□ -0.04
TPM3-220ENST00000509601 ZNF816-ZNF321PA0A0X1KG74 233 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 AKR7A2O43488 359 aa14.8□□□□□ -0.04
TPM3-220ENST00000509601 RIDAP52758 137 aaKnown RBP14.8□□□□□ -0.04
TPM3-220ENST00000509601 GMFBP60983 142 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms