RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 TOGARAM1Q9Y4F4 1720 aa3.92□□□□□ -1.78
NIPBL-206ENST00000509429 A0A1B0GUL6 1792 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 AKAP11Q9UKA4 1901 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 TNRC6CQ9HCJ0 1690 aaKnown RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 A0A087WUJ7 227 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 A0A0A6YYD5 115 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 TRAV39A0A0B4J263 110 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 TRBV4-1A0A0J9YWV2 114 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 TMEM218A2RU14 115 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 ANKUB1A6NFN9 424 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 FAM74A7A6NL05 159 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 SIRPB1O00241 398 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 GNG7O60262 68 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 FKBP6O75344 327 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 CNMDO75829 334 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 KCNK2O95069 426 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 CTSLP07711 333 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 FGF2P09038 288 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 SNRPCP09234 159 aaKnown RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 GIPP09681 153 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 GP9P14770 177 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 IDSP22304 550 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 PRPH2P23942 346 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 FCARP24071 287 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 HRH2P25021 359 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 MPZP25189 248 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 S100A2P29034 98 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 APLNRP35414 380 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 BDKRB1P46663 353 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 GSK3BP49841 420 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 CLRN1P58418 232 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 CDK5Q00535 292 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 ID2Q02363 134 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 TLE3Q04726 772 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 PRKCDQ05655 676 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 EIF2B1Q14232 305 aaKnown RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 EDDM3AQ14507 147 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 NEDD8Q15843 81 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 HIST2H2ACQ16777 129 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 FAM74A3Q4VXF1 159 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 TMEM97Q5BJF2 176 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 COL5A1-AS1Q5SY13 56 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 C1orf220Q5T0J3 134 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 AKR1C8PQ5T2L2 129 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 FAM102AQ5T9C2 384 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 CPTPQ5TA50 214 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 CST9Q5W186 159 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 OR4A47Q6IF82 309 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 WDR74Q6RFH5 385 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 ZNF474Q6S9Z5 364 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 PAMR1Q6UXH9 720 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 WDR82Q6UXN9 313 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 C6orf120Q7Z4R8 191 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 ARPINQ7Z6K5 226 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 DND1Q8IYX4 353 aaKnown RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 SLC39A11Q8N1S5 342 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 C11orf42Q8N5U0 333 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 CLDN19Q8N6F1 224 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 UBAC2Q8NBM4 344 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 CHST4Q8NCG5 386 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 VN1R2Q8NFZ6 395 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 OR5M9Q8NGP3 310 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 OR10R2Q8NGX6 335 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 OR14L1PQ8NHC6 308 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 SLC7A13Q8TCU3 470 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 TMEM171Q8WVE6 324 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 MRPS31Q92665 395 aaKnown RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 KAT6AQ92794 2004 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 ART4Q93070 314 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 ISOC1Q96CN7 298 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 MRPL53Q96EL3 112 aaKnown RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 SCMH1Q96GD3 660 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 HIST1H2AHQ96KK5 128 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 GUCD1Q96NT3 240 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 HIST1H2AAQ96QV6 131 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 DDOQ99489 341 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 HIST1H2AJQ99878 128 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 MARVELD1Q9BSK0 173 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 RSPO3Q9BXY4 272 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 NKX6-2Q9C056 277 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 OR11A1Q9GZK7 315 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 VN1R1Q9GZP7 353 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 SLC25A51Q9H1U9 297 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 DPAGT1Q9H3H5 408 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 PPDPFQ9H3Y8 114 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 NANOGQ9H9S0 305 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 FBXO6Q9NRD1 293 aaPredicted RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 FAM49BQ9NUQ9 324 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 LHX3Q9UBR4 397 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 UBQLN1Q9UMX0 589 aaKnown RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 SAMD4AQ9UPU9 718 aaKnown RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 AK6Q9Y3D8 172 aaKnown RBP3.91□□□□□ -1.78
NIPBL-206ENST00000509429 MYH1P12882 1939 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 WDR81Q562E7 1941 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 C1orf167Q5SNV9 1468 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 IGSF9BQ9UPX0 1349 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 KIF13BQ9NQT8 1826 aa3.91□□□□□ -1.78
NIPBL-206ENST00000509429 A0A087WX48 190 aa3.9□□□□□ -1.79
NIPBL-206ENST00000509429 IGHV2-70DA0A0C4DH43 119 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms