RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 GALNT4Q8N4A0 578 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 FAM216BQ8N7L0 139 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 H1FXQ92522 213 aaKnown RBP12.7□□□□□ -0.38
TPM3-219ENST00000509409 RPL3LQ92901 407 aaKnown RBP12.7□□□□□ -0.38
TPM3-219ENST00000509409 RNF170Q96K19 258 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 CLPTM1LQ96KA5 538 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 SNTG1Q9NSN8 517 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 DUX4Q9UBX2 424 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 MPC1Q9Y5U8 109 aa12.7□□□□□ -0.38
TPM3-219ENST00000509409 CLPSL1A2RUU4 121 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 SELENOFO60613 162 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 E2F6O75461 281 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 NDUFA7O95182 113 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 RPS7P62081 194 aaKnown RBP12.69□□□□□ -0.38
TPM3-219ENST00000509409 PRDX4Q13162 271 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 BRICD5Q6PL45 260 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 CPOQ8IVL8 374 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 ZNF454Q8N9F8 522 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 CCDC197Q8NCU1 140 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 OTOSQ8NHW6 89 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 C12orf43Q96C57 262 aaKnown RBP12.69□□□□□ -0.38
TPM3-219ENST00000509409 ASB9Q96DX5 294 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 THTPAQ9BU02 230 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 TEX12Q9BXU0 123 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 DPAGT1Q9H3H5 408 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 ABCB9Q9NP78 766 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 HAO2Q9NYQ3 351 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 TAS2R1Q9NYW7 299 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 ZNF391Q9UJN7 358 aa12.69□□□□□ -0.38
TPM3-219ENST00000509409 A0A1B0GVI7 797 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 A0A1W2PRD5 423 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 A0A1W2PRF3 423 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 A0A1W2PRM7 423 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 NKX6-3A6NJ46 265 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 GPR37O15354 613 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 IGHV4-59P01825 116 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 EEF1B2P24534 225 aaKnown RBP12.68□□□□□ -0.38
TPM3-219ENST00000509409 RELBQ01201 579 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 KRT77Q7Z794 578 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 TMEM179BQ7Z7N9 219 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 ADGRG5Q8IZF4 528 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 LY6G5BQ8NDX9 201 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 OR10Z1Q8NGY1 313 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 FAM81AQ8TBF8 368 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 CANT1Q8WVQ1 401 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 DYRK2Q92630 601 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 ITPKCQ96DU7 683 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 SIRT7Q9NRC8 400 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 LAMP5Q9UJQ1 280 aa12.68□□□□□ -0.38
TPM3-219ENST00000509409 CAB39Q9Y376 341 aaPredicted RBP12.68□□□□□ -0.38
TPM3-219ENST00000509409 ARRDC5A6NEK1 342 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 TMEM210A6NLX4 147 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.67□□□□□ -0.38
TPM3-219ENST00000509409 AKR7A2O43488 359 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 GPR137BO60478 399 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 CST4P01036 141 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 T-ENOLP0DO92 83 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 OSMP13725 252 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 PRKACGP22612 351 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 ACKR3P25106 362 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 IER3P46695 156 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 GABRA2P47869 451 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 TGM4P49221 684 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 DEFA6Q01524 100 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 PRB3Q04118 309 aaPredicted RBP12.67□□□□□ -0.38
TPM3-219ENST00000509409 ATPAF1Q5TC12 328 aaPredicted RBP12.67□□□□□ -0.38
TPM3-219ENST00000509409 ZDHHC23Q8IYP9 409 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 WFDC12Q8WWY7 111 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 OR5P3Q8WZ94 311 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 MED30Q96HR3 178 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 PKP2Q99959 881 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 DCTN5Q9BTE1 182 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 TLNRD1Q9H1K6 362 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 WDR13Q9H1Z4 485 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 NIPAL2Q9H841 368 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 RNF114Q9Y508 228 aa12.67□□□□□ -0.38
TPM3-219ENST00000509409 PKD1L1Q8TDX9 2849 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 BTBD17A6NE02 478 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 AQP12BA6NM10 295 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 PRODHO43272 600 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 NDUFB7P17568 137 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 GPM6AP51674 278 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 HCCSP53701 268 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 RPL15P61313 204 aaKnown RBP12.66□□□□□ -0.38
TPM3-219ENST00000509409 GUCA2AQ02747 115 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 SLC35D3Q5M8T2 416 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 STUMQ69YW2 141 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 GDPGP1Q6ZNW5 385 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 COMMD2Q86X83 199 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 LDLRAD3Q86YD5 345 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 AQP12AQ8IXF9 295 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 BBS1Q8NFJ9 593 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 OR8B12Q8NGG6 310 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 NPRL2Q8WTW4 380 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 LRTOMTQ8WZ04 291 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 LYZL4Q96KX0 146 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 RAB3IPQ96QF0 476 aaPredicted RBP12.66□□□□□ -0.38
TPM3-219ENST00000509409 DNTTIP1Q9H147 329 aa12.66□□□□□ -0.38
TPM3-219ENST00000509409 SLC25A10Q9UBX3 287 aaPredicted RBP12.66□□□□□ -0.38
TPM3-219ENST00000509409 MEGF8Q7Z7M0 2845 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms