RNA–Protein interactions for RNA: ENST00000509281.1

SNX2-208, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-208ENST00000509281 CAVIN4Q5BKX8 364 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 RNASE13Q5GAN3 156 aaKnown RBP1.57□□□□□ -2.16
SNX2-208ENST00000509281 FAM78AQ5JUQ0 283 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 ANXA8L1Q5VT79 327 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 FKBP1CQ5VVH2 108 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 NANOGP8Q6NSW7 305 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 SPESP1Q6UW49 350 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 C12orf54Q6X4T0 127 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 FAM122BQ7Z309 247 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 LUZP2Q86TE4 346 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 LGI3Q8N145 548 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 ZNF615Q8N8J6 731 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 NECAP1Q8NC96 275 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 CHST4Q8NCG5 386 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 GPR26Q8NDV2 337 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 COQ8AQ8NI60 647 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 ZNF461Q8TAF7 563 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 LRRC29Q8WV35 223 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 RGP1Q92546 391 aaPredicted RBP1.57□□□□□ -2.16
SNX2-208ENST00000509281 RPEQ96AT9 228 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 ZNF707Q96C28 371 aaPredicted RBP1.57□□□□□ -2.16
SNX2-208ENST00000509281 FLYWCH2Q96CP2 140 aaKnown RBP1.57□□□□□ -2.16
SNX2-208ENST00000509281 NRBF2Q96F24 287 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 CAMK2N2Q96S95 79 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 TIMM17AQ99595 171 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 ZYG11BQ9C0D3 744 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 SLC38A10Q9HBR0 1119 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 PRSS16Q9NQE7 514 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 C8orf17Q9NRJ1 99 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 PDP1Q9P0J1 537 aaPredicted RBP1.57□□□□□ -2.16
SNX2-208ENST00000509281 MARCOQ9UEW3 520 aaPredicted RBP1.57□□□□□ -2.16
SNX2-208ENST00000509281 DICER1Q9UPY3 1922 aaKnown RBP1.57□□□□□ -2.16
SNX2-208ENST00000509281 COL5A3P25940 1745 aaPredicted RBP1.57□□□□□ -2.16
SNX2-208ENST00000509281 TIAM2Q8IVF5 1701 aa1.57□□□□□ -2.16
SNX2-208ENST00000509281 SSC5DA1L4H1 1573 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 IGHV3-72A0A0B4J1Y9 119 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 ZNF99A8MXY4 864 aaPredicted RBP1.56□□□□□ -2.16
SNX2-208ENST00000509281 KRBOX1C9JBD0 128 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 K7EM74 188 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 NME4O00746 187 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 BCKDKO14874 412 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 HMMRO75330 724 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 FCN3O75636 299 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 SLC25A14O95258 325 aaPredicted RBP1.56□□□□□ -2.16
SNX2-208ENST00000509281 HBE1P02100 147 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 CLTAP09496 248 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 WARSP23381 471 aaKnown RBP1.56□□□□□ -2.16
SNX2-208ENST00000509281 OPRK1P41145 380 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 ATP5OP48047 213 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 SLC11A1P49279 550 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 SERPINB8P50452 374 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 FABP6P51161 128 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 P2RX1P51575 399 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 NDUFA8P51970 172 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 ZNF121P58317 390 aaPredicted RBP1.56□□□□□ -2.16
SNX2-208ENST00000509281 RPS23P62266 143 aaKnown RBP1.56□□□□□ -2.16
SNX2-208ENST00000509281 WDR43Q15061 677 aaKnown RBP eCLIP1.56□□□□□ -2.16
SNX2-208ENST00000509281 PSMD5Q16401 504 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 RPEL1Q2QD12 228 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 TRMT5Q32P41 509 aaKnown RBP1.56□□□□□ -2.16
SNX2-208ENST00000509281 TMEM31Q5JXX7 168 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 MFSD14CQ5VZR4 134 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 FBXW9Q5XUX1 488 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 WDFY1Q8IWB7 410 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 FAM71AQ8IYT1 594 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 KATNAL2Q8IYT4 538 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 TTC29Q8NA56 475 aaPredicted RBP1.56□□□□□ -2.16
SNX2-208ENST00000509281 OR52K2Q8NGK3 314 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 APH1BQ8WW43 257 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 FOXC2Q99958 501 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 UQCC2Q9BRT2 126 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 FGF23Q9GZV9 251 aaPredicted RBP1.56□□□□□ -2.16
SNX2-208ENST00000509281 PORCNQ9H237 461 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 C20orf96Q9NUD7 363 aaPredicted RBP1.56□□□□□ -2.16
SNX2-208ENST00000509281 SIGLEC9Q9Y336 463 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 UBIAD1Q9Y5Z9 338 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 KIAA0100Q14667 2235 aaKnown RBP1.56□□□□□ -2.16
SNX2-208ENST00000509281 COL6A3P12111 3177 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 MKI67P46013 3256 aaKnown RBP1.56□□□□□ -2.16
SNX2-208ENST00000509281 TRPM7Q96QT4 1865 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 ZNF609O15014 1411 aa1.56□□□□□ -2.16
SNX2-208ENST00000509281 COL4A1P02462 1669 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 IGHV3OR16-9A0A0B4J2B5 98 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 M0R3G1 203 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 WRBO00258 174 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 SIVA1O15304 175 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 RDH16O75452 317 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 CNMDO75829 334 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 CCNB2O95067 398 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 IGLV3-25P01717 112 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 HLA-HP01893 362 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 HLA-DQA1P01909 254 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 CD74P04233 296 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 DTYMKP23919 212 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 ADORA1P30542 326 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 SLC1A2P43004 574 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 CXCL12P48061 93 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 CCL23P55773 120 aa1.55□□□□□ -2.16
SNX2-208ENST00000509281 RPL23P62829 140 aaKnown RBP1.55□□□□□ -2.16
SNX2-208ENST00000509281 CACNG7P62955 275 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms