RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 PNLDC1Q8NA58 520 aaKnown RBP6.99□□□□□ -1.29
COL4A5-208ENST00000505728 C9orf106Q8NAJ2 232 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 OR5M9Q8NGP3 310 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 OR52I2Q8NH67 350 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 MBD3L2Q8NHZ7 208 aaPredicted RBP6.99□□□□□ -1.29
COL4A5-208ENST00000505728 KCNG3Q8TAE7 436 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 APOBEC3DQ96AK3 386 aaPredicted RBP6.99□□□□□ -1.29
COL4A5-208ENST00000505728 SPSB1Q96BD6 273 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 CPNE2Q96FN4 548 aaPredicted RBP6.99□□□□□ -1.29
COL4A5-208ENST00000505728 ABHD17AQ96GS6 310 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 POM121L2Q96KW2 1035 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 TECTBQ96PL2 329 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 GPER1Q99527 375 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 NEURL2Q9BR09 285 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 HEATR1Q9H583 2144 aaKnown RBP6.99□□□□□ -1.29
COL4A5-208ENST00000505728 OPA3Q9H6K4 179 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 AUNIPQ9H7T9 357 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 SCPEP1Q9HB40 452 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 COPZ2Q9P299 210 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 MTFP1Q9UDX5 166 aa6.99□□□□□ -1.29
COL4A5-208ENST00000505728 MRPS28Q9Y2Q9 187 aaKnown RBP6.99□□□□□ -1.29
COL4A5-208ENST00000505728 ZNF816-ZNF321PA0A0X1KG74 233 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 ANKRD20A5PA0PJZ0 165 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 MEIOCA2RUB1 952 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 J3QW42 95 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 K7EM74 188 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 GMDSO60547 372 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 NRASP01111 189 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 MELTFP08582 738 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 TRAPPC2P0DI81 140 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 TRAPPC2BP0DI82 140 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 NAT2P11245 290 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 EDN3P14138 238 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 IGHV1-2P23083 117 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 ACKR3P25106 362 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 PTGFRP43088 359 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 SRP9P49458 86 aaKnown RBP6.98□□□□□ -1.29
COL4A5-208ENST00000505728 ZNF92Q03936 586 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 PMPCAQ10713 525 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 MALLQ13021 153 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 TNK1Q13470 666 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 KISS1Q15726 138 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 UBE2V2Q15819 145 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 GSG1Q2KHT4 349 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 PLA1AQ53H76 456 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 RNASE12Q5GAN4 147 aaKnown RBP6.98□□□□□ -1.29
COL4A5-208ENST00000505728 OLFML2AQ68BL7 652 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 ZNF324BQ6AW86 544 aaPredicted RBP6.98□□□□□ -1.29
COL4A5-208ENST00000505728 ZNF585AQ6P3V2 769 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 FAM180AQ6UWF9 173 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 BIVMQ86UB2 503 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 ZNF101Q8IZC7 436 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 C1orf162Q8NEQ5 155 aaPredicted RBP6.98□□□□□ -1.29
COL4A5-208ENST00000505728 OR5L1Q8NGL2 311 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 PIGTQ969N2 578 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 CREB3L1Q96BA8 519 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 ZNF75AQ96N20 296 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 MARVELD1Q9BSK0 173 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 URM1Q9BTM9 101 aaKnown RBP6.98□□□□□ -1.29
COL4A5-208ENST00000505728 REPIN1Q9BWE0 567 aaKnown RBP6.98□□□□□ -1.29
COL4A5-208ENST00000505728 CACNG6Q9BXT2 260 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 MMP28Q9H239 520 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 DPAGT1Q9H3H5 408 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 NLKQ9UBE8 527 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 KCNN3Q9UGI6 736 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 ZNF107Q9UII5 783 aaPredicted RBP6.98□□□□□ -1.29
COL4A5-208ENST00000505728 ING4Q9UNL4 249 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 PROCRQ9UNN8 238 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 SLC7A11Q9UPY5 501 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 NUBP2Q9Y5Y2 271 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 CENPEQ02224 2701 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 PRR14LQ5THK1 2151 aa6.98□□□□□ -1.29
COL4A5-208ENST00000505728 SPTBN1Q01082 2364 aaKnown RBP6.97□□□□□ -1.29
COL4A5-208ENST00000505728 C5orf49A4QMS7 147 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 ZNF503-AS2A6NEH8 195 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 HMX3A6NHT5 357 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 FIGNL2A6NMB9 653 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 INMT-MINDY4F8WBC2 141 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 RAB27BO00194 218 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 KDM4BO94953 1096 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 DHFRP00374 187 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 TCRBP04435 133 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 TPOP07202 933 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 CSF1P09603 554 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 HLA-DMAP28067 261 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 BTCP35070 178 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 FAUP35544 74 aaKnown RBP6.97□□□□□ -1.29
COL4A5-208ENST00000505728 TIMP3P35625 211 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 OR3A4PP47883 348 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 FUT6P51993 359 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 ATP1B3P54709 279 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 RAG2P55895 527 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 ACTBP60709 375 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 UBE2NP61088 152 aaKnown RBP6.97□□□□□ -1.29
COL4A5-208ENST00000505728 ACTG1P63261 375 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 SRSF1Q07955 248 aaKnown RBP eCLIP6.97□□□□□ -1.29
COL4A5-208ENST00000505728 MRPL49Q13405 166 aaKnown RBP6.97□□□□□ -1.29
COL4A5-208ENST00000505728 UNC119Q13432 240 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 GABRA6Q16445 453 aa6.97□□□□□ -1.29
COL4A5-208ENST00000505728 ZNF260Q3ZCT1 412 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms