RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	PPP1R8	Q12972	351 aa	Known RBP	13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	PRDX4	Q13162	271 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	LCN8	Q6JVE9	175 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	KCTD18	Q6PI47	426 aa	Predicted RBP	13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	WDR82	Q6UXN9	313 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	CD300LD	Q6UXZ3	194 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	THAP5	Q7Z6K1	395 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	LDLRAD3	Q86YD5	345 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	ZDHHC23	Q8IYP9	409 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	OR10Z1	Q8NGY1	313 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	OR4Q3	Q8NH05	313 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	OR5R1	Q8NH85	324 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	ZNF671	Q8TAW3	534 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	PIGC	Q92535	297 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	FAM234A	Q9H0X4	552 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	MMP27	Q9H306	513 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066	RHBDD3	Q9Y3P4	386 aa		13.53	□□□□□ -0.24
DDR1-256	ENST00000505066		A0A0U1RQK1	487 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	hCG_38984	A0A1B0GV85	526 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	hCG_1809904	A0A1W2PP81	198 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066		A0A1W2PPE2	198 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066		A0A1W2PR64	198 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066		A0A1W2PRV1	198 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	FAM183A	A6NL82	134 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	ZNF850	A8MQ14	1090 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	PRODH	O43272	600 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	CALB2	P22676	271 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	IER3	P46695	156 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	MAP2K3	P46734	347 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	GABRA2	P47869	451 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	CAPZA1	P52907	286 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	ZNRF4	Q8WWF5	429 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	FEV	Q99581	238 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	PRRG3	Q9BZD7	231 aa		13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.52	□□□□□ -0.25
DDR1-256	ENST00000505066	ARRDC5	A6NEK1	342 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066		H0YAE9	185 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	IGHV4-59	P01825	116 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	GLRA1	P23415	457 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	TGFBR2	P37173	567 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	OPRL1	P41146	370 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	ACTR3	P61158	418 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	CSNK2B	P67870	215 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	TAF9	Q16594	264 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	PDLIM3	Q53GG5	364 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	LCN1P1	Q5VSP4	162 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	PLBD1	Q6P4A8	553 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	METAP1D	Q6UB28	335 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	C1orf122	Q6ZSJ8	110 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	PIGW	Q7Z7B1	504 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	FAM216B	Q8N7L0	139 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	OR5D13	Q8NGL4	314 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	OTOS	Q8NHW6	89 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	CCDC124	Q96CT7	223 aa	Known RBP	13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	ASB9	Q96DX5	294 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	PKP2	Q99959	881 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	MRO	Q9BYG7	248 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	METTL8	Q9H825	291 aa	Known RBP	13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	MED20	Q9H944	212 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	SIRT7	Q9NRC8	400 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	PDP1	Q9P0J1	537 aa	Predicted RBP	13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	SF3B6	Q9Y3B4	125 aa	Known RBP	13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	TMEM14A	Q9Y6G1	99 aa		13.51	□□□□□ -0.25
DDR1-256	ENST00000505066	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	MEIOC	A2RUB1	952 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	ACOD1	A6NK06	481 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	ACOT8	O14734	319 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	NPFF	O15130	113 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	MTRF1	O75570	445 aa	Known RBP	13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	CST4	P01036	141 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	GINS1	Q14691	196 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	OCLN	Q16625	522 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	SLC35D3	Q5M8T2	416 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	IQCF1	Q8N6M8	205 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	OR5T2	Q8NGG2	359 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	OR5P3	Q8WZ94	311 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	TAF15	Q92804	592 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	ITPKC	Q96DU7	683 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	DCTN5	Q9BTE1	182 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	CHID1	Q9BWS9	393 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	SNTG1	Q9NSN8	517 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	VPREB3	Q9UKI3	123 aa		13.5	□□□□□ -0.25
DDR1-256	ENST00000505066	TCRBV5S2	A0A599	114 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	C5orf63	A6NC05	138 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066		M0R1W7	72 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	KCNAB3	O43448	404 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	ANXA8	P13928	327 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	ATP6V1B1	P15313	513 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	PSMA6	P60900	246 aa	Known RBP	13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	GNG3	P63215	75 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	HOXA4	Q00056	320 aa	Predicted RBP	13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	ACSM1	Q08AH1	577 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	C2orf68	Q2NKX9	166 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	LINC01590	Q5TEZ4	76 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	CCDC197	Q8NCU1	140 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	LY6G5B	Q8NDX9	201 aa		13.49	□□□□□ -0.25
DDR1-256	ENST00000505066	TMEM185A	Q8NFB2	350 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms