RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 LIPKQ5VXJ0 399 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 KCTD8Q6ZWB6 473 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 ZNF367Q7RTV3 350 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 WDR86Q86TI4 376 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 ZNF525Q8N782 197 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 TSPAN14Q8NG11 270 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 OR8S1Q8NH09 359 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 UBASH3BQ8TF42 649 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 NPRL2Q8WTW4 380 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 HPSE2Q8WWQ2 592 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 NEU4Q8WWR8 484 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 TMED9Q9BVK6 235 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 ZNF696Q9H7X3 374 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 PLEKHA1Q9HB21 404 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 ZNF275Q9NSD4 429 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 UFSP2Q9NUQ7 469 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 DCAF16Q9NXF7 216 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 NKIRAS2Q9NYR9 191 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 FBXO9Q9UK97 447 aaPredicted RBP11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 ZNF281Q9Y2X9 895 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 ARID1AO14497 2285 aa11.24□□□□□ -0.61
PDLIM7-212ENST00000504380 MTORP42345 2549 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 A0A1W2PPK0 400 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 C3orf80F5H4A9 247 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 ERCC1P07992 297 aaPredicted RBP11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 CD55P08174 381 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 ADH4P08319 380 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 RPSAP08865 295 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 ZNF20P17024 532 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 TNFSF4P23510 183 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 PSMB9P28065 219 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 THBS2P35442 1172 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 PMELP40967 661 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 HOXA4Q00056 320 aaPredicted RBP11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 BDH1Q02338 343 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 MPPED2Q15777 294 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 UBE2V2Q15819 145 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 PCGF3Q3KNV8 242 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 ARMCX4Q5H9R4 360 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 CLVS2Q5SYC1 327 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 PLCXD3Q63HM9 321 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 KRTAP1-3Q8IUG1 177 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 ZDHHC23Q8IYP9 409 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 ZNF420Q8TAQ5 688 aaPredicted RBP11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 TRMT10AQ8TBZ6 339 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 OR5P3Q8WZ94 311 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 UFD1Q92890 307 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 TMEM203Q969S6 136 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 POM121Q96HA1 1249 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 RNF170Q96K19 258 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 DIRC2Q96SL1 478 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 CXXC4Q9H2H0 198 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 SAP30LQ9HAJ7 183 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 DHDHQ9UQ10 334 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 MPC1Q9Y5U8 109 aa11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 PRRC2AP48634 2157 aaKnown RBP11.23□□□□□ -0.61
PDLIM7-212ENST00000504380 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 TRBV5-5A0A0J9YX44 114 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 OCM2P0CE71 109 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 CPEP16870 476 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 ZNF12P17014 697 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 GPM6AP51674 278 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 MLLT11Q13015 90 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 TPBGQ13641 420 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 SSX1Q16384 188 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 FAM209AQ5JX71 171 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 ZBTB37Q5TC79 503 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 UBE2UQ5VVX9 321 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 TMEM42Q69YG0 159 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 ZNF826PQ6ZT77 177 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 RNF144BQ7Z419 303 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 MOGAT3Q86VF5 341 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 PHC2Q8IXK0 858 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 CCDC54Q8NEL0 328 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 GPR148Q8TDV2 347 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 ITPKCQ96DU7 683 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 HIST1H2AAQ96QV6 131 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 OR14A2Q96R54 314 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 NR1H4Q96RI1 486 aaPredicted RBP11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 MICU1Q9BPX6 476 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 EGLN1Q9GZT9 426 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 SLC22A4Q9H015 551 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 ISYNA1Q9NPH2 558 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 TAS2R4Q9NYW5 299 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 IL19Q9UHD0 177 aa11.22□□□□□ -0.61
PDLIM7-212ENST00000504380 A0A087WXM4 84 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 IGKV1-9A0A0C4DH69 117 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 IGHV1-69-2A0A0G2JMI3 117 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 FAM230AA0A1W2PPH8 454 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 ANXA2P2A6NMY6 339 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 ZNF732B4DXR9 585 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 CD1AP06126 327 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 SMIM18P0DKX4 95 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 CD200P41217 278 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 SRP9P49458 86 aaKnown RBP11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 GP2P55259 537 aaKnown RBP11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 CEACAM21Q3KPI0 293 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 YIF1BQ5BJH7 314 aa11.21□□□□□ -0.61
PDLIM7-212ENST00000504380 Q5PR19 223 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms