RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 APOFQ13790 326 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 C16orf87Q6PH81 154 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 PDZD9Q8IXQ8 264 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 GALNT4Q8N4A0 578 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 ZNF454Q8N9F8 522 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 PAPD5Q8NDF8 572 aaKnown RBP13.43□□□□□ -0.26
SCLT1-204ENST00000503215 ST8SIA4Q92187 359 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 ZDHHC16Q969W1 377 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 PPP1R14AQ96A00 147 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 TLNRD1Q9H1K6 362 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 VCXQ9H320 206 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 SP140LQ9H930 580 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 ZMAT3Q9HA38 289 aaKnown RBP13.43□□□□□ -0.26
SCLT1-204ENST00000503215 ZNF556Q9HAH1 456 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 SNTG1Q9NSN8 517 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 TVP23BQ9NYZ1 205 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 KAAG1Q9UBP8 84 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 LRP12Q9Y561 859 aa13.43□□□□□ -0.26
SCLT1-204ENST00000503215 M0R129 80 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 P2RY10O00398 339 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 PRODHO43272 600 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 TIPRLO75663 272 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 MRPL3P09001 348 aaKnown RBP13.42□□□□□ -0.26
SCLT1-204ENST00000503215 ANXA8P13928 327 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 MDKP21741 143 aaPredicted RBP13.42□□□□□ -0.26
SCLT1-204ENST00000503215 CFL1P23528 166 aaKnown RBP13.42□□□□□ -0.26
SCLT1-204ENST00000503215 GNALP38405 381 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 DAPP51397 102 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 RPS7P62081 194 aaKnown RBP13.42□□□□□ -0.26
SCLT1-204ENST00000503215 MICBQ29980 383 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 Q6YL49 198 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 BCDIN3DQ7Z5W3 292 aaKnown RBP13.42□□□□□ -0.26
SCLT1-204ENST00000503215 CSNK2A3Q8NEV1 391 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 SGMS2Q8NHU3 365 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 HPSE2Q8WWQ2 592 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 OR5P3Q8WZ94 311 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 PIGCQ92535 297 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 LHX4Q969G2 390 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 TTTY10Q9BZA0 68 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 RGCCQ9H4X1 137 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 SLC25A19Q9HC21 320 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 TRIM36Q9NQ86 728 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 ETAA1Q9NY74 926 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 RPUSD1Q9UJJ7 312 aaKnown RBP13.42□□□□□ -0.26
SCLT1-204ENST00000503215 PKD1L1Q8TDX9 2849 aa13.42□□□□□ -0.26
SCLT1-204ENST00000503215 TRRAPQ9Y4A5 3859 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 FAM181BA6NEQ2 426 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 SRRM5B3KS81 715 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 MITFO75030 526 aaPredicted RBP13.41□□□□□ -0.26
SCLT1-204ENST00000503215 CST4P01036 141 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 LIPFP07098 398 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 MUC1P15941 1255 aaPredicted RBP13.41□□□□□ -0.26
SCLT1-204ENST00000503215 CRISP1P54107 249 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 PSMA6P60900 246 aaKnown RBP13.41□□□□□ -0.26
SCLT1-204ENST00000503215 SNAPC1Q16533 368 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 DNAL1Q4LDG9 190 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 FAHD1Q6P587 224 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 PNLDC1Q8NA58 520 aaKnown RBP13.41□□□□□ -0.26
SCLT1-204ENST00000503215 SCCPDHQ8NBX0 429 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 UTP4Q969X6 686 aaKnown RBP13.41□□□□□ -0.26
SCLT1-204ENST00000503215 TMIGD2Q96BF3 282 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 RNF170Q96K19 258 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 TEAD3Q99594 435 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 PKP2Q99959 881 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 MICU1Q9BPX6 476 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 CADM1Q9BY67 442 aaKnown RBP13.41□□□□□ -0.26
SCLT1-204ENST00000503215 CHIAQ9BZP6 476 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 COPS3Q9UNS2 423 aa13.41□□□□□ -0.26
SCLT1-204ENST00000503215 IGHV1-69DA0A0B4J2H0 117 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 MAGEB4O15481 346 aaPredicted RBP13.4□□□□□ -0.26
SCLT1-204ENST00000503215 AKR7A2O43488 359 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 PRKYO43930 277 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 IGHV1-69P01742 117 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 MELTFP08582 738 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 EPHA2P29317 976 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 TGM4P49221 684 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 RELBQ01201 579 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 SRSF4Q08170 494 aaKnown RBP13.4□□□□□ -0.26
SCLT1-204ENST00000503215 IKZF1Q13422 519 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 SLC35D3Q5M8T2 416 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 METTL11BQ5VVY1 283 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 SHISA2Q6UWI4 295 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 KRT77Q7Z794 578 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 FAM210AQ96ND0 272 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 CNTD2Q9H8S5 307 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 PAPOLBQ9NRJ5 636 aaKnown RBP13.4□□□□□ -0.26
SCLT1-204ENST00000503215 FAM206AQ9NX38 181 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 LAMP5Q9UJQ1 280 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 MPC1Q9Y5U8 109 aa13.4□□□□□ -0.26
SCLT1-204ENST00000503215 A0A0U1RQK1 487 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 ANXA2P2A6NMY6 339 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 GSC2O15499 205 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 RHBDL1O75783 438 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 DCTDP32321 178 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 IL13RA1P78552 427 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 IL5RAQ01344 420 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 PTGES3Q15185 160 aaKnown RBP13.39□□□□□ -0.27
SCLT1-204ENST00000503215 FAM76BQ5HYJ3 339 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 STUMQ69YW2 141 aa13.39□□□□□ -0.27
SCLT1-204ENST00000503215 FIP1L1Q6UN15 594 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms