RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ZDHHC21Q8IVQ6 265 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 CYB561A3Q8NBI2 242 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 ZNRF1Q8ND25 227 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 OR5K1Q8NHB7 308 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 RPL3LQ92901 407 aaKnown RBP12.55□□□□□ -0.4
HDAC6-236ENST00000498808 COPS4Q9BT78 406 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 NSRP1Q9H0G5 558 aaKnown RBP12.55□□□□□ -0.4
HDAC6-236ENST00000498808 HEXA-AS1Q9H8Q6 139 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 PCDHGB5Q9Y5G0 923 aa12.55□□□□□ -0.4
HDAC6-236ENST00000498808 IGKV1D-17A0A075B6S4 117 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 hCG_38984A0A1B0GV85 526 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 OR2AT4A6NND4 320 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 ZNF682O95780 498 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 NHLRC4P0CG21 123 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-236ENST00000498808 ZNF823P16415 610 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 LGALS4P56470 323 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 SPIBQ01892 262 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 SEC23BQ15437 767 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 DCXRQ7Z4W1 244 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 LINC00482Q8N8I6 264 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 SDR9C7Q8NEX9 313 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 TMEM185AQ8NFB2 350 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 RPS4Y2Q8TD47 263 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 KCNJ15Q99712 375 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 PAPOLGQ9BWT3 736 aaKnown RBP12.54□□□□□ -0.4
HDAC6-236ENST00000498808 FGF23Q9GZV9 251 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-236ENST00000498808 TMBIM4Q9HC24 238 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 NLKQ9UBE8 527 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 ZNF222Q9UK12 451 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 RHBDD3Q9Y3P4 386 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 TSSC4Q9Y5U2 329 aaPredicted RBP12.54□□□□□ -0.4
HDAC6-236ENST00000498808 DNAH1Q9P2D7 4330 aa12.54□□□□□ -0.4
HDAC6-236ENST00000498808 TRBV4-1A0A0J9YWV2 114 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 A0A1W2PRQ8 180 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 TCRBV4S1A1TA0A5B7 111 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 TVP23AA6NH52 213 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 MRASO14807 208 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 TBX1O43435 398 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 GLCEO94923 617 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 H1F0P07305 194 aaKnown RBP12.53□□□□□ -0.4
HDAC6-236ENST00000498808 PYCR1P32322 319 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 GNALP38405 381 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 GABRA2P47869 451 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 SLC7A2P52569 658 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 DCTN2Q13561 401 aaKnown RBP12.53□□□□□ -0.4
HDAC6-236ENST00000498808 DGCR6Q14129 220 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 FGD3Q5JSP0 725 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 LDLRAD2Q5SZI1 272 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 AGBL2Q5U5Z8 902 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 OR4C15Q8NGM1 316 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 FANK1Q8TC84 345 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 ZNRF4Q8WWF5 429 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 MYDGFQ969H8 173 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 SGK3Q96BR1 496 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 REEP6Q96HR9 211 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 HSH2DQ96JZ2 352 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 MICU1Q9BPX6 476 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 OR52D1Q9H346 318 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 PITPNC1Q9UKF7 332 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 RAB21Q9UL25 225 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 ENPP4Q9Y6X5 453 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 DNAH7Q8WXX0 4024 aa12.53□□□□□ -0.4
HDAC6-236ENST00000498808 NPPAP01160 153 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 ALDOBP05062 364 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 PSG2P11465 335 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 SLC6A6P31641 620 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 DCTDP32321 178 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 TIGD6Q17RP2 521 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 COQ5Q5HYK3 327 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 NKAPLQ5M9Q1 402 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 ZNF782Q6ZMW2 699 aaPredicted RBP12.52□□□□□ -0.41
HDAC6-236ENST00000498808 FKBP9P1Q75LS8 142 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 CBLL1Q75N03 491 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 DPF1Q92782 380 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 SLAMF6Q96DU3 332 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 CHID1Q9BWS9 393 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 ABCB10Q9NRK6 738 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 CENPMQ9NSP4 180 aa12.52□□□□□ -0.41
HDAC6-236ENST00000498808 GAR1Q9NY12 217 aaKnown RBP12.52□□□□□ -0.41
HDAC6-236ENST00000498808 HUWE1Q7Z6Z7 4374 aaKnown RBP12.52□□□□□ -0.41
HDAC6-236ENST00000498808 ANXA2P2A6NMY6 339 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 RHBDL1O75783 438 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 CHRM2P08172 466 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 CCDC159P0C7I6 412 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 CCL3L1P16619 93 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 JUNBP17275 347 aaPredicted RBP12.51□□□□□ -0.41
HDAC6-236ENST00000498808 GSK3AP49840 483 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 SLC25A1P53007 311 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 IL5RAQ01344 420 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 SSX2Q16385 188 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 CASC10Q5T4H9 136 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 TMEM200BQ69YZ2 307 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 CYP4Z1Q86W10 505 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 IFT27Q9BW83 186 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 RTL8AQ9BWD3 113 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 GPR61Q9BZJ8 451 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 LRP12Q9Y561 859 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 COMMD3-BMI1R4GMX3 469 aa12.51□□□□□ -0.41
HDAC6-236ENST00000498808 TMEM210A6NLX4 147 aa12.5□□□□□ -0.41
HDAC6-236ENST00000498808 ODF3BA8MYP8 253 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms