RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 LYSMD2Q8IV50 215 aa14.6□□□□□ -0.07
LMNA-216ENST00000496738 CDH26Q8IXH8 852 aa14.6□□□□□ -0.07
LMNA-216ENST00000496738 JAGN1Q8N5M9 183 aa14.6□□□□□ -0.07
LMNA-216ENST00000496738 SAMD12Q8N8I0 201 aa14.6□□□□□ -0.07
LMNA-216ENST00000496738 OR5D14Q8NGL3 314 aa14.6□□□□□ -0.07
LMNA-216ENST00000496738 ZNF671Q8TAW3 534 aa14.6□□□□□ -0.07
LMNA-216ENST00000496738 APOBEC3DQ96AK3 386 aaPredicted RBP14.6□□□□□ -0.07
LMNA-216ENST00000496738 ACTR6Q9GZN1 396 aa14.6□□□□□ -0.07
LMNA-216ENST00000496738 ZCCHC4Q9H5U6 513 aa14.6□□□□□ -0.07
LMNA-216ENST00000496738 CDH20Q9HBT6 801 aa14.6□□□□□ -0.07
LMNA-216ENST00000496738 AIPO00170 330 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 XRCC2O43543 280 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 RAB3AP20336 220 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 FAM3AP98173 230 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 ZNF45Q02386 682 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 P2RY14Q15391 338 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 MZT2AQ6P582 158 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 RNF144BQ7Z419 303 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 CCDC190Q86UF4 302 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 SEMA6DQ8NFY4 1073 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 OR52N4Q8NGI2 321 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 LGALS14Q8TCE9 139 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 SNAPC3Q92966 411 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 BOD1Q96IK1 185 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 RNF170Q96K19 258 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 KCNK15Q9H427 330 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 PPP1R3EQ9H7J1 279 aa14.59□□□□□ -0.07
LMNA-216ENST00000496738 hCG_38984A0A1B0GV85 526 aa14.58□□□□□ -0.07
LMNA-216ENST00000496738 GSK3AP49840 483 aa14.58□□□□□ -0.07
LMNA-216ENST00000496738 GK2Q14410 553 aaPredicted RBP14.58□□□□□ -0.07
LMNA-216ENST00000496738 TMEM211Q6ICI0 200 aa14.58□□□□□ -0.07
LMNA-216ENST00000496738 COQ3Q9NZJ6 369 aa14.58□□□□□ -0.07
LMNA-216ENST00000496738 SLC25A15Q9Y619 301 aa14.58□□□□□ -0.07
LMNA-216ENST00000496738 TSPAN4O14817 238 aa14.58□□□□□ -0.08
LMNA-216ENST00000496738 UPK1BO75841 260 aa14.58□□□□□ -0.08
LMNA-216ENST00000496738 IGKV3-15P01624 115 aa14.58□□□□□ -0.08
LMNA-216ENST00000496738 CECR9P0C854 216 aa14.58□□□□□ -0.08
LMNA-216ENST00000496738 PSMB1P20618 241 aaKnown RBP14.58□□□□□ -0.08
LMNA-216ENST00000496738 BDKRB2P30411 391 aa14.58□□□□□ -0.08
LMNA-216ENST00000496738 CCKARP32238 428 aa14.58□□□□□ -0.08
LMNA-216ENST00000496738 ZNF83P51522 516 aa14.58□□□□□ -0.08
LMNA-216ENST00000496738 C22orf34Q6ZV56 151 aa14.58□□□□□ -0.08
LMNA-216ENST00000496738 AKAP1Q92667 903 aaKnown RBP eCLIP14.58□□□□□ -0.08
LMNA-216ENST00000496738 DIRAS2Q96HU8 199 aa14.58□□□□□ -0.08
LMNA-216ENST00000496738 ST6GAL2Q96JF0 529 aa14.58□□□□□ -0.08
LMNA-216ENST00000496738 AMDHD2Q9Y303 409 aa14.58□□□□□ -0.08
LMNA-216ENST00000496738 ERVS71-1P61550 626 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 MALLQ13021 153 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 TAB1Q15750 504 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 MRPL21Q7Z2W9 205 aaKnown RBP14.57□□□□□ -0.08
LMNA-216ENST00000496738 ACOT12Q8WYK0 555 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 RGCCQ9H4X1 137 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 GPR173Q9NS66 373 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 IGHV1-18A0A0C4DH31 117 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 IGKV1-9A0A0C4DH69 117 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 PRSS44E7EML9 344 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 EIF4EP06730 217 aaKnown RBP14.57□□□□□ -0.08
LMNA-216ENST00000496738 ELK1P19419 428 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 ETV6P41212 452 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 GLT8D1Q68CQ7 371 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 OR5AS1Q8N127 324 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 KCTD12Q96CX2 325 aaKnown RBP14.57□□□□□ -0.08
LMNA-216ENST00000496738 TMEM138Q9NPI0 162 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 ABCB10Q9NRK6 738 aa14.57□□□□□ -0.08
LMNA-216ENST00000496738 USP24Q9UPU5 2620 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 M0R1B8 84 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 HCKP08631 526 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 SPNP16150 400 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 THBS4P35443 961 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 MAP2K3P46734 347 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 RIPPLY1Q0D2K3 151 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 UBE2V2Q15819 145 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 TIMM23BQ5SRD1 257 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 PGAP1Q75T13 922 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 PIGTQ969N2 578 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 SPSB4Q96A44 273 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 OBP2BQ9NPH6 170 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 JKAMPQ9P055 326 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 MYEF2Q9P2K5 600 aaKnown RBP14.56□□□□□ -0.08
LMNA-216ENST00000496738 COL6A6A6NMZ7 2263 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 LOC390937A0A1W2PQ73 354 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 SMPD2O60906 423 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 ZNF780AO75290 641 aaPredicted RBP14.56□□□□□ -0.08
LMNA-216ENST00000496738 AZGP1P25311 298 aaKnown RBP14.56□□□□□ -0.08
LMNA-216ENST00000496738 PLA2G7Q13093 441 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 PPA1Q15181 289 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 RAB11BQ15907 218 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 ZNF181Q2M3W8 571 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 ZNF529Q6P280 563 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 CNIH2Q6PI25 160 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 Q6ZSR3 168 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 POC5Q8NA72 575 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 BHLHE23Q8NDY6 225 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 OR51D1Q8NGF3 324 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 ZC3HAV1LQ96H79 300 aaKnown RBP14.56□□□□□ -0.08
LMNA-216ENST00000496738 WDFY2Q96P53 400 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 CHST5Q9GZS9 411 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 CRIM1Q9NZV1 1036 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 OR5V1Q9UGF6 321 aa14.56□□□□□ -0.08
LMNA-216ENST00000496738 STEAP1Q9UHE8 339 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms