RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 ZFP41Q8N8Y5 198 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 OR8B3Q8NGG8 313 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 PERPQ96FX8 193 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 MED30Q96HR3 178 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 OR8B2Q96RD0 313 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 KCNIP1Q9NZI2 227 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 COPS3Q9UNS2 423 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 IGHV1-69-2A0A0G2JMI3 117 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 LRP5LA4QPB2 252 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 CYSRT1A8MQ03 144 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 H7C1Q1 480 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 NDUFB3O43676 98 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 THBDP07204 575 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 FAHP16930 419 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 CPT2P23786 658 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 GRNP28799 593 aaKnown RBP7.42□□□□□ -1.22
U2AF1-212ENST00000496462 NKX6-1P78426 367 aaPredicted RBP7.42□□□□□ -1.22
U2AF1-212ENST00000496462 ZNF85Q03923 595 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 ESCO2Q56NI9 601 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 FDX2Q6P4F2 183 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 DNAAF1Q8NEP3 725 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 CAPSLQ8WWF8 208 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 DDOQ99489 341 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 C1orf123Q9NWV4 160 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 FOXJ3Q9UPW0 622 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 PLEKHA6Q9Y2H5 1048 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 ITPR2Q14571 2701 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 LOC100509620A0A075B734 347 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 PPIAL4EA0A075B759 164 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 WIPF3A6NGB9 483 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 PPIAL4DF5H284 164 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 SULT1B1O43704 296 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 CDC14BO60729 498 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 TMEM127O75204 238 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 CLDN1O95832 211 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 SCG5P05408 212 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 CD1AP06126 327 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 UCHL1P09936 223 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 PPIAL4FP0DN26 164 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 CALRP27797 417 aaKnown RBP7.42□□□□□ -1.22
U2AF1-212ENST00000496462 ZNF93P35789 620 aaPredicted RBP7.42□□□□□ -1.22
U2AF1-212ENST00000496462 MAP2K4P45985 399 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 HAGHLQ6PII5 290 aaPredicted RBP7.42□□□□□ -1.22
U2AF1-212ENST00000496462 CELF2-AS1Q8N7Q2 184 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 CHST4Q8NCG5 386 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 TBC1D15Q8TC07 691 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 PPP1R14AQ96A00 147 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 SGK3Q96BR1 496 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 PPIAL4AQ9Y536 164 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 NPTNQ9Y639 398 aa7.42□□□□□ -1.22
U2AF1-212ENST00000496462 ANKHD1Q8IWZ3 2542 aaKnown RBP7.41□□□□□ -1.22
U2AF1-212ENST00000496462 CACNA1CQ13936 2221 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 E7EQL1 145 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 J3QT63 122 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 SH2D1BO14796 132 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 RGS5O15539 181 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 MAS1P04201 325 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 LPLP06858 475 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 ZNF35P13682 527 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 ZNF44P15621 663 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 ZNF250P15622 560 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 RAB3BP20337 219 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 CD276Q5ZPR3 534 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 USP43Q70EL4 1123 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 RAB2BQ8WUD1 216 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 EMG1Q92979 244 aaKnown RBP7.41□□□□□ -1.22
U2AF1-212ENST00000496462 MRPL37Q9BZE1 423 aaKnown RBP7.41□□□□□ -1.22
U2AF1-212ENST00000496462 MSL2Q9HCI7 577 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 ZNF275Q9NSD4 429 aaPredicted RBP7.41□□□□□ -1.22
U2AF1-212ENST00000496462 OR5V1Q9UGF6 321 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 ROS1P08922 2347 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 TRIM64BA6NI03 449 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 NCR1O76036 304 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 CST4P01036 141 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 NGFP01138 241 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 LIMS3P0CW19 117 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 LIMS4P0CW20 117 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 PRF1P14222 555 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 DAOP14920 347 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 AZGP1P25311 298 aaKnown RBP7.41□□□□□ -1.22
U2AF1-212ENST00000496462 NTF4P34130 210 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 CCL8P80075 99 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 ZNF92Q03936 586 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 SCN1BQ07699 218 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 TPBGQ13641 420 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 DOC2BQ14184 412 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 BTNL3Q6UXE8 466 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 SPARTQ8N0X7 666 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 KCNG3Q8TAE7 436 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 FAM46BQ96A09 425 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 REPIN1Q9BWE0 567 aaKnown RBP7.41□□□□□ -1.22
U2AF1-212ENST00000496462 MPDZO75970 2070 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 HAAOP46952 286 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 ARHGDIBP52566 201 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 SPOCK1Q08629 439 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 NHLRC1Q6VVB1 395 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 MOGAT3Q86VF5 341 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 OR6M1Q8NGM8 313 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 OR10Z1Q8NGY1 313 aa7.41□□□□□ -1.22
U2AF1-212ENST00000496462 LRRC29Q8WV35 223 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms