RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 PGAM5Q96HS1 289 aa19.1■□□□□ 0.65
COL27A1-208ENST00000494780 RBM4BQ9BQ04 359 aaKnown RBP19.1■□□□□ 0.65
COL27A1-208ENST00000494780 RTL8AQ9BWD3 113 aa19.1■□□□□ 0.65
COL27A1-208ENST00000494780 MUC13Q9H3R2 512 aa19.1■□□□□ 0.65
COL27A1-208ENST00000494780 HAO2Q9NYQ3 351 aa19.1■□□□□ 0.65
COL27A1-208ENST00000494780 U3KQV3 271 aa19.1■□□□□ 0.65
COL27A1-208ENST00000494780 NOTCH1P46531 2555 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 FAM183AA6NL82 134 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 ATP8B1O43520 1251 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 GLCEO94923 617 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 H2BFMP0C1H6 154 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 EEF1B2P24534 225 aaKnown RBP19.09■□□□□ 0.65
COL27A1-208ENST00000494780 TAF9Q16594 264 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 TIGD4Q8IY51 512 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 TEX47Q8TBZ9 253 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 AMELYQ99218 206 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 C16orf95Q9H693 158 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 MED20Q9H944 212 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 ABCB9Q9NP78 766 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 BRD7Q9NPI1 651 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 SIRT7Q9NRC8 400 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 ZNRD1Q9P1U0 126 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 DNAJB11Q9UBS4 358 aa19.09■□□□□ 0.65
COL27A1-208ENST00000494780 BTBD17A6NE02 478 aa19.08■□□□□ 0.64
COL27A1-208ENST00000494780 TMEM210A6NLX4 147 aa19.08■□□□□ 0.64
COL27A1-208ENST00000494780 GK3PQ14409 553 aa19.08■□□□□ 0.64
COL27A1-208ENST00000494780 LCN8Q6JVE9 175 aa19.08■□□□□ 0.64
COL27A1-208ENST00000494780 Q6ZSV7 163 aa19.08■□□□□ 0.64
COL27A1-208ENST00000494780 ARHGAP24Q8N264 748 aa19.08■□□□□ 0.64
COL27A1-208ENST00000494780 Q8N7P7 452 aa19.08■□□□□ 0.64
COL27A1-208ENST00000494780 UBE2FQ969M7 185 aa19.08■□□□□ 0.64
COL27A1-208ENST00000494780 OTULINQ96BN8 352 aa19.08■□□□□ 0.64
COL27A1-208ENST00000494780 RAB3IPQ96QF0 476 aaPredicted RBP19.08■□□□□ 0.64
COL27A1-208ENST00000494780 TCF7L1Q9HCS4 588 aa19.08■□□□□ 0.64
COL27A1-208ENST00000494780 VPREB3Q9UKI3 123 aa19.08■□□□□ 0.64
COL27A1-208ENST00000494780 NKX6-3A6NJ46 265 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 RNASEK-C17orf49H0YIS7 233 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 PRDX4Q13162 271 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 FAM98BQ52LJ0 330 aaKnown RBP19.07■□□□□ 0.64
COL27A1-208ENST00000494780 DHRS7BQ6IAN0 325 aaPredicted RBP19.07■□□□□ 0.64
COL27A1-208ENST00000494780 C1orf122Q6ZSJ8 110 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 PIGWQ7Z7B1 504 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 DHFR2Q86XF0 187 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.07■□□□□ 0.64
COL27A1-208ENST00000494780 OR10G2Q8NGC3 310 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 OR5T2Q8NGG2 359 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 OR5P3Q8WZ94 311 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 MED30Q96HR3 178 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 NIPSNAP1Q9BPW8 284 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 SEMA6AQ9H2E6 1030 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 CMYA5Q8N3K9 4069 aa19.07■□□□□ 0.64
COL27A1-208ENST00000494780 SLC22A31A6NKX4 558 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 ZNF850A8MQ14 1090 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 NPFFO15130 113 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 CST4P01036 141 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 PAICSP22234 425 aaKnown RBP19.06■□□□□ 0.64
COL27A1-208ENST00000494780 FAM76BQ5HYJ3 339 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 ZNF788Q6ZQV5 615 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 IQCF1Q8N6M8 205 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 ZNF454Q8N9F8 522 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 OTOSQ8NHW6 89 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 H1FXQ92522 213 aaKnown RBP19.06■□□□□ 0.64
COL27A1-208ENST00000494780 RPL3LQ92901 407 aaKnown RBP19.06■□□□□ 0.64
COL27A1-208ENST00000494780 WDR13Q9H1Z4 485 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 OR51V1Q9H2C8 321 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 ZNF391Q9UJN7 358 aa19.06■□□□□ 0.64
COL27A1-208ENST00000494780 H3BN98 237 aa19.05■□□□□ 0.64
COL27A1-208ENST00000494780 TSPAN9O75954 239 aa19.05■□□□□ 0.64
COL27A1-208ENST00000494780 LYNP07948 512 aa19.05■□□□□ 0.64
COL27A1-208ENST00000494780 SELLP14151 372 aa19.05■□□□□ 0.64
COL27A1-208ENST00000494780 ACKR3P25106 362 aa19.05■□□□□ 0.64
COL27A1-208ENST00000494780 GMFBP60983 142 aa19.05■□□□□ 0.64
COL27A1-208ENST00000494780 TRIM25Q14258 630 aaKnown RBP19.05■□□□□ 0.64
COL27A1-208ENST00000494780 TNFRSF14Q92956 283 aa19.05■□□□□ 0.64
COL27A1-208ENST00000494780 GAFA1Q96PS6 74 aa19.05■□□□□ 0.64
COL27A1-208ENST00000494780 PKP2Q99959 881 aa19.05■□□□□ 0.64
COL27A1-208ENST00000494780 SNTG1Q9NSN8 517 aa19.05■□□□□ 0.64
COL27A1-208ENST00000494780 SLC25A10Q9UBX3 287 aaPredicted RBP19.05■□□□□ 0.64
COL27A1-208ENST00000494780 B2RBV5 119 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 M0R1W7 72 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 TGFBR2P37173 567 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 PRB3Q04118 309 aaPredicted RBP19.04■□□□□ 0.64
COL27A1-208ENST00000494780 DGUOKQ16854 277 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 NCR3LG1Q68D85 454 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 KCTD8Q6ZWB6 473 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 OR5R1Q8NH85 324 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 ANGPTL6Q8NI99 470 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 GIPC3Q8TF64 312 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 THEM6Q8WUY1 208 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 PIGCQ92535 297 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 RNF170Q96K19 258 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 FEVQ99581 238 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 NIPAL2Q9H841 368 aa19.04■□□□□ 0.64
COL27A1-208ENST00000494780 ARRDC5A6NEK1 342 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 PRR23D1E9PI22 279 aaPredicted RBP19.03■□□□□ 0.64
COL27A1-208ENST00000494780 SIGLEC5O15389 551 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 AKR7A2O43488 359 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 PAHP00439 452 aa19.03■□□□□ 0.64
COL27A1-208ENST00000494780 PRR23D2P0DMB1 279 aaPredicted RBP19.03■□□□□ 0.64
COL27A1-208ENST00000494780 DCTDP32321 178 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms