RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 CFPP27918 469 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 MAP2K3P46734 347 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 COMPP49747 757 aaPredicted RBP12.94□□□□□ -0.34
LIMS2-216ENST00000494613 PSMA6P60900 246 aaKnown RBP12.94□□□□□ -0.34
LIMS2-216ENST00000494613 BAMBIQ13145 260 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 LCN1P1Q5VSP4 162 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 KRT74Q7RTS7 529 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 SCCPDHQ8NBX0 429 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 OR5T2Q8NGG2 359 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 TMEM163Q8TC26 289 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 RPL3LQ92901 407 aaKnown RBP12.94□□□□□ -0.34
LIMS2-216ENST00000494613 DUX5Q96PT3 197 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 HIST1H2AAQ96QV6 131 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 OR8B4Q96RC9 309 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 CCL13Q99616 98 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 PKP2Q99959 881 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 APOL4Q9BPW4 351 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 FGF23Q9GZV9 251 aaPredicted RBP12.94□□□□□ -0.34
LIMS2-216ENST00000494613 PBOV1Q9GZY1 135 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 SEMA6AQ9H2E6 1030 aa12.94□□□□□ -0.34
LIMS2-216ENST00000494613 ZNF879B4DU55 563 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.93□□□□□ -0.34
LIMS2-216ENST00000494613 TMPRSS2O15393 492 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 MAGEB4O15481 346 aaPredicted RBP12.93□□□□□ -0.34
LIMS2-216ENST00000494613 FCGR1AP12314 374 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 PRTN3P24158 256 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 MTNR1AP48039 350 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 NXNL2Q5VZ03 156 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 C9orf139Q6ZV77 190 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 BTN2A1Q7KYR7 527 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 PNLDC1Q8NA58 520 aaKnown RBP12.93□□□□□ -0.34
LIMS2-216ENST00000494613 ITFG2Q969R8 447 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 CENPNQ96H22 339 aaPredicted RBP12.93□□□□□ -0.34
LIMS2-216ENST00000494613 C1orf147Q96MC9 270 aaPredicted RBP12.93□□□□□ -0.34
LIMS2-216ENST00000494613 RTL8AQ9BWD3 113 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 PRRG3Q9BZD7 231 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 GABARAPL1Q9H0R8 117 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 CNTD2Q9H8S5 307 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 ABCB9Q9NP78 766 aa12.93□□□□□ -0.34
LIMS2-216ENST00000494613 SLC22A31A6NKX4 558 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 TMEM210A6NLX4 147 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 SRRM5B3KS81 715 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 TOX4O94842 621 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 ECDO95905 644 aaPredicted RBP12.92□□□□□ -0.34
LIMS2-216ENST00000494613 SFTPBP07988 381 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 AMY2BP19961 511 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 TGM4P49221 684 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 RIDAP52758 137 aaKnown RBP12.92□□□□□ -0.34
LIMS2-216ENST00000494613 CXCR4P61073 352 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 ARF6P62330 175 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 C11orf91Q3C1V1 193 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 DMRTC1Q5HYR2 192 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 WDR38Q5JTN6 314 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 ATPAF1Q5TC12 328 aaPredicted RBP12.92□□□□□ -0.34
LIMS2-216ENST00000494613 ZNF322Q6U7Q0 402 aaPredicted RBP12.92□□□□□ -0.34
LIMS2-216ENST00000494613 KCTD8Q6ZWB6 473 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 ASRGL1Q7L266 308 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 SLC35F2Q8IXU6 374 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 FGFRL1Q8N441 504 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 FAM81AQ8TBF8 368 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 OR51E1Q8TCB6 317 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 CNN2Q99439 309 aaKnown RBP12.92□□□□□ -0.34
LIMS2-216ENST00000494613 CIB1Q99828 191 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 PCGF1Q9BSM1 259 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 TTTY10Q9BZA0 68 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 WDR13Q9H1Z4 485 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 ADGRL4Q9HBW9 690 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 HAO2Q9NYQ3 351 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 IKZF2Q9UKS7 526 aa12.92□□□□□ -0.34
LIMS2-216ENST00000494613 TRAV40A0A0B4J280 105 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 ZNF816-ZNF321PA0A0X1KG74 233 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 A0A1B0GW55 424 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 DNAJC9-AS1A6NH13 148 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 AKR7A2O43488 359 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 SRSF10O75494 262 aaKnown RBP12.91□□□□□ -0.34
LIMS2-216ENST00000494613 CIB2O75838 187 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 IGLV3-1P01715 115 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 DUX4L2P0CJ85 424 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 DUX4L3P0CJ86 424 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 DUX4L4P0CJ87 422 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 DUX4L5P0CJ88 424 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 DUX4L6P0CJ89 424 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 DUX4L7P0CJ90 424 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 MMP9P14780 707 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 ATP6V1B1P15313 513 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 GPM6AP51674 278 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 BPIFB3P59826 476 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 GMFBP60983 142 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 ACTR3P61158 418 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 RIPPLY1Q0D2K3 151 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 SLC9A3R2Q15599 337 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 CEACAM21Q3KPI0 293 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 DUX4L9Q6RFH8 374 aaPredicted RBP12.91□□□□□ -0.34
LIMS2-216ENST00000494613 BRD3OSQ6XYD6 125 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 MOB3CQ70IA8 216 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 ZDHHC23Q8IYP9 409 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 C3orf56Q8N813 242 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 OR5A2Q8NGI9 324 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 OR10Z1Q8NGY1 313 aa12.91□□□□□ -0.34
LIMS2-216ENST00000494613 HPSE2Q8WWQ2 592 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms