RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 NVLO15381 856 aaKnown RBP2.62□□□□□ -1.99
SMC4-224ENST00000494612 AKR7A2O43488 359 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 CHST1O43916 411 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 RP2O75695 350 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 OR2F2O95006 317 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 CD160O95971 181 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 OR56A5P0C7T3 313 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 TCN2P20062 427 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 WARSP23381 471 aaKnown RBP2.62□□□□□ -1.99
SMC4-224ENST00000494612 U2AF2P26368 475 aaKnown RBP eCLIP2.62□□□□□ -1.993e-7■■■■■ 36
SMC4-224ENST00000494612 HMOX2P30519 316 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 SSTR5P35346 364 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 HCAR3P49019 387 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 P2RX1P51575 399 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 PPP1CBP62140 327 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 DGCR6Q14129 220 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 TMEM53Q6P2H8 277 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 TTC23LQ6PF05 361 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 NTM-AS1Q6ZSK4 140 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 GABRG1Q8N1C3 465 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 PDCL2Q8N4E4 241 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 OR52E2Q8NGJ4 325 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 OR8U1Q8NH10 309 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 COQ8AQ8NI60 647 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 OR51E1Q8TCB6 317 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 TSEN15Q8WW01 171 aaKnown RBP2.62□□□□□ -1.99
SMC4-224ENST00000494612 NTAN1Q96AB6 310 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 KIAA1143Q96AT1 154 aaPredicted RBP2.62□□□□□ -1.99
SMC4-224ENST00000494612 ISG20Q96AZ6 181 aaKnown RBP2.62□□□□□ -1.99
SMC4-224ENST00000494612 API5Q9BZZ5 524 aaKnown RBP2.62□□□□□ -1.99
SMC4-224ENST00000494612 SLC7A5P2Q9GIP4 190 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 MFSD1Q9H3U5 465 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 SAV1Q9H4B6 383 aaPredicted RBP2.62□□□□□ -1.99
SMC4-224ENST00000494612 HMG20AQ9NP66 347 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 ACP6Q9NPH0 428 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 LYARQ9NX58 379 aaKnown RBP2.62□□□□□ -1.99
SMC4-224ENST00000494612 ZNRD1Q9P1U0 126 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 MTFP1Q9UDX5 166 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 Q9Y3F1 56 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 TET2Q6N021 2002 aaPredicted RBP2.62□□□□□ -1.99
SMC4-224ENST00000494612 NCOR1O75376 2440 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 RALGAPA2Q2PPJ7 1873 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 ZFHX4Q86UP3 3567 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 TRIOO75962 3097 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 PIEZO1Q92508 2521 aa2.62□□□□□ -1.99
SMC4-224ENST00000494612 IGLV4-60A0A075B6I1 120 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 TRBV9A0A0B4J1U6 114 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 OR6C74A6NCV1 312 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 NCBP2LA6PVI3 153 aaKnown RBP2.61□□□□□ -1.99
SMC4-224ENST00000494612 LOC730098B7Z3J9 87 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 H7C1H1 209 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 RBFOX2O43251 390 aaKnown RBP eCLIP2.61□□□□□ -1.99
SMC4-224ENST00000494612 VAMP5O95183 116 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 TPM1P09493 284 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 PSMC3P17980 439 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 DTYMKP23919 212 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 OTX1P32242 354 aaPredicted RBP2.61□□□□□ -1.99
SMC4-224ENST00000494612 NUP62P37198 522 aaPredicted RBP2.61□□□□□ -1.99
SMC4-224ENST00000494612 NBL1P41271 181 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 RPS5P46782 204 aaKnown RBP2.61□□□□□ -1.99
SMC4-224ENST00000494612 CARD18P57730 90 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 SSX9Q7RTT3 188 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 CALHM1Q8IU99 346 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 FAM71AQ8IYT1 594 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 CBR4Q8N4T8 237 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 TTC29Q8NA56 475 aaPredicted RBP2.61□□□□□ -1.99
SMC4-224ENST00000494612 CHST4Q8NCG5 386 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 GPR26Q8NDV2 337 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 OR4C5Q8NGB2 326 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 OR9G4Q8NGQ1 327 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 OR5K2Q8NHB8 316 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 MRGPRFQ96AM1 343 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 UCK2Q9BZX2 261 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 CYP3A43Q9HB55 503 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 SLC38A10Q9HBR0 1119 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 C20orf96Q9NUD7 363 aaPredicted RBP2.61□□□□□ -1.99
SMC4-224ENST00000494612 TBC1D24Q9ULP9 559 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 TSSC4Q9Y5U2 329 aaPredicted RBP2.61□□□□□ -1.99
SMC4-224ENST00000494612 KCNE3Q9Y6H6 103 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 BAZ2AQ9UIF9 1905 aaKnown RBP2.61□□□□□ -1.99
SMC4-224ENST00000494612 MYH4Q9Y623 1939 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 ZNF532Q9HCE3 1301 aa2.61□□□□□ -1.99
SMC4-224ENST00000494612 ATG2AQ2TAZ0 1938 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 SCN10AQ9Y5Y9 1956 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 CACNA1AO00555 2505 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 MICAL3Q7RTP6 2002 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 TMEM150BA6NC51 233 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 K7EMT4 169 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 SCAMP2O15127 329 aaKnown RBP2.6□□□□□ -1.99
SMC4-224ENST00000494612 RAD51CO43502 376 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 LSM8O95777 96 aaKnown RBP2.6□□□□□ -1.99
SMC4-224ENST00000494612 CLTAP09496 248 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 ERGP11308 486 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 RAB3AP20336 220 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 GSTM3P21266 225 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 STOMP27105 288 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 MRPL19P49406 292 aaKnown RBP2.6□□□□□ -1.99
SMC4-224ENST00000494612 RAB9AP51151 201 aa2.6□□□□□ -1.99
SMC4-224ENST00000494612 BCAP31P51572 246 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms