RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 TMEM203Q969S6 136 aa12.73□□□□□ -0.37
ACTB-213ENST00000493945 ERGIC1Q969X5 290 aa12.73□□□□□ -0.37
ACTB-213ENST00000493945 BORCS8Q96FH0 119 aa12.73□□□□□ -0.37
ACTB-213ENST00000493945 MSL2Q9HCI7 577 aa12.73□□□□□ -0.37
ACTB-213ENST00000493945 IL19Q9UHD0 177 aa12.73□□□□□ -0.37
ACTB-213ENST00000493945 FOXJ3Q9UPW0 622 aa12.73□□□□□ -0.37
ACTB-213ENST00000493945 RHBDD3Q9Y3P4 386 aa12.73□□□□□ -0.37
ACTB-213ENST00000493945 TRDV1A0A1B0GX56 115 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 A0A1W2PPR1 153 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 C5orf63A6NC05 138 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 GABRPO00591 440 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 PDCD5O14737 125 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 ALX3O95076 343 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 CD55P08174 381 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 SOD3P08294 240 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 HCKP08631 526 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 NAT2P11245 290 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 IRF2P14316 349 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 PSMD7P51665 324 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 FUT6P51993 359 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 ATP1B3P54709 279 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 GP2P55259 537 aaKnown RBP12.72□□□□□ -0.37
ACTB-213ENST00000493945 RPS25P62851 125 aaKnown RBP12.72□□□□□ -0.37
ACTB-213ENST00000493945 SSX1Q16384 188 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 TMEM42Q69YG0 159 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 C11orf71Q6IPW1 123 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 ZNF573Q86YE8 665 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 PNLDC1Q8NA58 520 aaKnown RBP12.72□□□□□ -0.37
ACTB-213ENST00000493945 DNAAF1Q8NEP3 725 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 OR51A4Q8NGJ6 313 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 OR11L1Q8NGX0 322 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 DERL3Q96Q80 235 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 TMEM138Q9NPI0 162 aa12.72□□□□□ -0.37
ACTB-213ENST00000493945 MYEF2Q9P2K5 600 aaKnown RBP12.72□□□□□ -0.37
ACTB-213ENST00000493945 ARFGEF3Q5TH69 2177 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 ZSCAN5BA6NJL1 495 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 LRRC30A6NM36 301 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 AIREO43918 545 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 CSF3P09919 207 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 ATF1P18846 271 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 CD200P41217 278 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 RBP2P50120 134 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 PRSS12P56730 875 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 MSMPQ1L6U9 139 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 C1orf87Q8N0U7 546 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 OR10AD1Q8NGE0 317 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 OR13F1Q8NGS4 319 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 OR13C9Q8NGT0 318 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 OR10AC1Q8NH08 325 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 UBASH3BQ8TF42 649 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 RGP1Q92546 391 aaPredicted RBP12.71□□□□□ -0.37
ACTB-213ENST00000493945 ADAT3Q96EY9 351 aaPredicted RBP12.71□□□□□ -0.37
ACTB-213ENST00000493945 RNF170Q96K19 258 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 KCTD7Q96MP8 289 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 FN3KRPQ9HA64 309 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 GPR173Q9NS66 373 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 BEX4Q9NWD9 120 aaPredicted RBP12.71□□□□□ -0.37
ACTB-213ENST00000493945 POLDIP2Q9Y2S7 368 aa12.71□□□□□ -0.37
ACTB-213ENST00000493945 A0A1B0GWJ7 208 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 LRP5LA4QPB2 252 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 A6NLC8 198 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 IGHV1-46P01743 117 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 UCHL1P09936 223 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 AZGP1P25311 298 aaKnown RBP12.7□□□□□ -0.38
ACTB-213ENST00000493945 BDKRB2P30411 391 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 FGF9P31371 208 aaPredicted RBP12.7□□□□□ -0.38
ACTB-213ENST00000493945 TGFBR2P37173 567 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 RPS11P62280 158 aaKnown RBP eCLIP12.7□□□□□ -0.38
ACTB-213ENST00000493945 MRPS11P82912 194 aaKnown RBP12.7□□□□□ -0.38
ACTB-213ENST00000493945 MST1LQ2TV78 715 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 CEP78Q5JTW2 689 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 GLT8D1Q68CQ7 371 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 CD200R1LQ6Q8B3 271 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 OR1M1Q8NGA1 313 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 OR13C5Q8NGS8 318 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 OR5P3Q8WZ94 311 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 FOXRED1Q96CU9 486 aaPredicted RBP12.7□□□□□ -0.38
ACTB-213ENST00000493945 ITPKCQ96DU7 683 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 OR2V2Q96R30 315 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 GPER1Q99527 375 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 S100A13Q99584 98 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 BCL7BQ9BQE9 202 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 SOX7Q9BT81 388 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 TPK1Q9H3S4 243 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 NOX4Q9NPH5 578 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 DLL4Q9NR61 685 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 SNTG1Q9NSN8 517 aa12.7□□□□□ -0.38
ACTB-213ENST00000493945 TRBV5-7A0A0A0MS05 114 aa12.69□□□□□ -0.38
ACTB-213ENST00000493945 LOC100506127A0A0U1RQW1 187 aa12.69□□□□□ -0.38
ACTB-213ENST00000493945 GPX5O75715 221 aa12.69□□□□□ -0.38
ACTB-213ENST00000493945 SC5DO75845 299 aa12.69□□□□□ -0.38
ACTB-213ENST00000493945 ANOS1P23352 680 aa12.69□□□□□ -0.38
ACTB-213ENST00000493945 CALRP27797 417 aaKnown RBP12.69□□□□□ -0.38
ACTB-213ENST00000493945 ALDH3B2P48448 385 aa12.69□□□□□ -0.38
ACTB-213ENST00000493945 EFNA4P52798 201 aa12.69□□□□□ -0.38
ACTB-213ENST00000493945 CAPZA1P52907 286 aa12.69□□□□□ -0.38
ACTB-213ENST00000493945 FABP5Q01469 135 aa12.69□□□□□ -0.38
ACTB-213ENST00000493945 TNK1Q13470 666 aa12.69□□□□□ -0.38
ACTB-213ENST00000493945 HFEQ30201 348 aa12.69□□□□□ -0.38
ACTB-213ENST00000493945 UNQ9370/PRO34162Q6UXP9 181 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms