RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 GK2Q14410 553 aaPredicted RBP12.12□□□□□ -0.47
VCP-207ENST00000493886 HFEQ30201 348 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 SLC22A6Q4U2R8 563 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 CDCP2Q5VXM1 449 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 RGS7BPQ6MZT1 257 aaPredicted RBP12.12□□□□□ -0.47
VCP-207ENST00000493886 TFAP2EQ6VUC0 442 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 TMEM123Q8N131 208 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 KDF1Q8NAX2 398 aaPredicted RBP12.12□□□□□ -0.47
VCP-207ENST00000493886 OR1M1Q8NGA1 313 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 OR8B12Q8NGG6 310 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 PSMF1Q92530 271 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 SEC22AQ96IW7 307 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 TAS2R8Q9NYW2 309 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 BDP1A6H8Y1 2624 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 KIAA1549Q9HCM3 1950 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 DOCK10Q96BY6 2186 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 LRRC3CA6NJW4 275 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 ATG12O94817 140 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 OR4E1P0C645 316 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 RFPL3SP0C7P2 107 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 MSR1P21757 451 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 CX3CR1P49238 355 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 CYB561P49447 251 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 ZNF133P52736 654 aaPredicted RBP12.12□□□□□ -0.47
VCP-207ENST00000493886 RTN4RL2Q86UN3 420 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 ZIC4Q8N9L1 334 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 OR52N4Q8NGI2 321 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 OR5D14Q8NGL3 314 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 SEH1LQ96EE3 360 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 PFDN5Q99471 154 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 NELFAQ9H3P2 528 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 CNTD2Q9H8S5 307 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 GPR160Q9UJ42 338 aa12.12□□□□□ -0.47
VCP-207ENST00000493886 NCKAP5O14513 1909 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 MBP02144 154 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 ZP3P21754 424 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 MECP2P51608 486 aaKnown RBP12.11□□□□□ -0.47
VCP-207ENST00000493886 RAC3P60763 192 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 GRB2P62993 217 aaKnown RBP12.11□□□□□ -0.47
VCP-207ENST00000493886 ZNF660Q6AZW8 331 aaPredicted RBP12.11□□□□□ -0.47
VCP-207ENST00000493886 ABHD12BQ7Z5M8 362 aaPredicted RBP12.11□□□□□ -0.47
VCP-207ENST00000493886 COMMD2Q86X83 199 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 ZNF283Q8N7M2 679 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 SCARB1Q8WTV0 552 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 KCNE4Q8WWG9 221 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 SLC39A7Q92504 469 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 SSX3Q99909 188 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 TMPRSS13Q9BYE2 586 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 DEPPQ9NTK1 212 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 ZNF319Q9P2F9 582 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 SESN1Q9Y6P5 492 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 AHCTF1Q8WYP5 2266 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 DHHO43323 396 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 KCNAB3O43448 404 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 DNPH1O43598 174 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 SMPD2O60906 423 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 IGHV2-70P01814 119 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 ANOS1P23352 680 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 TMEM164Q5U3C3 297 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 FOXL2NBQ6ZUU3 175 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 PRR18Q8N4B5 295 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 STEAP2Q8NFT2 490 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 OR13C9Q8NGT0 318 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 GPX8Q8TED1 209 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 THOC3Q96J01 351 aaKnown RBP12.11□□□□□ -0.47
VCP-207ENST00000493886 CYYR1Q96J86 154 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 SOX7Q9BT81 388 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 SHARPINQ9H0F6 387 aa12.11□□□□□ -0.47
VCP-207ENST00000493886 FOXD3Q9UJU5 478 aaPredicted RBP12.11□□□□□ -0.47
VCP-207ENST00000493886 CCDC187A0A096LP49 1063 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 MT-CO3P00414 261 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 F10P00742 488 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 ZNF20P17024 532 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 HOXC12P31275 282 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 DLSTP36957 453 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 ENDOGQ14249 297 aaKnown RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 DMRTC1Q5HYR2 192 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 OR52W1Q6IF63 320 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 ZNF529Q6P280 563 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 FAM57BQ71RH2 274 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 SLC22A24Q8N4F4 322 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 GVQW1Q8N7I0 195 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 PTX4Q96A99 478 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 NABP1Q96AH0 204 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 SF3B5Q9BWJ5 86 aaKnown RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 RBM24Q9BX46 236 aaKnown RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 GPR84Q9NQS5 396 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 NOP16Q9Y3C1 178 aaKnown RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 TRAPPC6AO75865 159 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 CYB5AP00167 134 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 S100A9P06702 114 aaKnown RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 S100PP25815 95 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 SUCLG1P53597 346 aaKnown RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 GMFBP60983 142 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 DEFA6Q01524 100 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 LY6G6FQ5SQ64 297 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 RBMS3Q6XE24 437 aaKnown RBP12.1□□□□□ -0.47
VCP-207ENST00000493886 GGNQ86UU5 652 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 BPIFB2Q8N4F0 458 aa12.1□□□□□ -0.47
VCP-207ENST00000493886 C12orf45Q8N5I9 185 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms