RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 VMO1Q7Z5L0 202 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 KRT77Q7Z794 578 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 ZNF454Q8N9F8 522 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 SCCPDHQ8NBX0 429 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 PKP2Q99959 881 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 WDR13Q9H1Z4 485 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 PRDM13Q9H4Q3 707 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 ACOXLQ9NUZ1 547 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 KAAG1Q9UBP8 84 aa12.09□□□□□ -0.47
ATG4B-223ENST00000493618 RPUSD1Q9UJJ7 312 aaKnown RBP12.09□□□□□ -0.47
ATG4B-223ENST00000493618 A0A0U1RQK1 487 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 GYG2O15488 501 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 PRODHO43272 600 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 AKR7A2O43488 359 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 TIPRLO75663 272 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 ECDO95905 644 aaPredicted RBP12.08□□□□□ -0.48
ATG4B-223ENST00000493618 AMY2BP19961 511 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 BPIFB3P59826 476 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 PSMA6P60900 246 aaKnown RBP12.08□□□□□ -0.48
ATG4B-223ENST00000493618 IL5RAQ01344 420 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 SRSF4Q08170 494 aaKnown RBP12.08□□□□□ -0.48
ATG4B-223ENST00000493618 PDCD1Q15116 288 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 DMRTC1Q5HYR2 192 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 PRR31Q5SQ13 230 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 RHOUQ7L0Q8 258 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 TRPM8Q7Z2W7 1104 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 GALNT4Q8N4A0 578 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 KIR3DL3Q8N743 410 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 HPSE2Q8WWQ2 592 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 OR5P3Q8WZ94 311 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 H1FXQ92522 213 aaKnown RBP12.08□□□□□ -0.48
ATG4B-223ENST00000493618 RNF170Q96K19 258 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 TLNRD1Q9H1K6 362 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 SEMA6AQ9H2E6 1030 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 RGCCQ9H4X1 137 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 CNTD2Q9H8S5 307 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 NOX4Q9NPH5 578 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 TVP23BQ9NYZ1 205 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 DNAJB9Q9UBS3 223 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 LAMP5Q9UJQ1 280 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 MPC1Q9Y5U8 109 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 TRRAPQ9Y4A5 3859 aa12.08□□□□□ -0.48
ATG4B-223ENST00000493618 A0A1W2PRD5 423 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 A0A1W2PRF3 423 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 A0A1W2PRM7 423 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 NDUFB3O43676 98 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 CST4P01036 141 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 CRYBA1P05813 215 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 ANXA8P13928 327 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 GPM6AP51674 278 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 RAG2P55895 527 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 RELBQ01201 579 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 SNAPC1Q16533 368 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 DNAL1Q4LDG9 190 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 CEP78Q5JTW2 689 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 SLC35D3Q5M8T2 416 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 STUMQ69YW2 141 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 SLC36A1Q7Z2H8 476 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 ZDHHC23Q8IYP9 409 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 FTMTQ8N4E7 242 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 FAM81AQ8TBF8 368 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 FAM71F1Q96KD3 344 aaPredicted RBP12.07□□□□□ -0.48
ATG4B-223ENST00000493618 ZNF696Q9H7X3 374 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 NIPAL2Q9H841 368 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 SLC25A19Q9HC21 320 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 SIRT7Q9NRC8 400 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 HAO2Q9NYQ3 351 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 C1RLQ9NZP8 487 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 ZNF391Q9UJN7 358 aa12.07□□□□□ -0.48
ATG4B-223ENST00000493618 TCRBV3S1A0A5B6 114 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 CCDC182A6NF36 153 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 NKX6-3A6NJ46 265 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 TMEM210A6NLX4 147 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 POM121CA8CG34 1229 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 PRR32B1ATL7 298 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 M0R129 80 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 IGHV4-59P01825 116 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 ALOX5APP20292 161 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 TGM4P49221 684 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 CRISP1P54107 249 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 KLRD1Q13241 179 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 SNCBQ16143 134 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 CDONQ4KMG0 1287 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 BCDIN3DQ7Z5W3 292 aaKnown RBP12.06□□□□□ -0.48
ATG4B-223ENST00000493618 COMMD2Q86X83 199 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 PIP4P2Q8N4L2 257 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 LY6G5BQ8NDX9 201 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 OR10Z1Q8NGY1 313 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 PPP1R14AQ96A00 147 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 SLC7A6OSQ96CW6 309 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-223ENST00000493618 GAFA1Q96PS6 74 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 RAB3IPQ96QF0 476 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-223ENST00000493618 YY1AP1Q9H869 796 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 ELL3Q9HB65 397 aaPredicted RBP12.06□□□□□ -0.48
ATG4B-223ENST00000493618 PAPOLBQ9NRJ5 636 aaKnown RBP12.06□□□□□ -0.48
ATG4B-223ENST00000493618 COPS3Q9UNS2 423 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 POMPQ9Y244 141 aa12.06□□□□□ -0.48
ATG4B-223ENST00000493618 TMEM269A0A1B0GVZ9 245 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 ZNF732B4DXR9 585 aa12.05□□□□□ -0.48
ATG4B-223ENST00000493618 PRKYO43930 277 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms